RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 KIFC3Q9BVG8 833 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
SEC13-204ENST00000397099 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.31■□□□□ 0.04
SEC13-204ENST00000397099 MTMR6Q9Y217 621 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 SF3B1O75533 1304 aaKnown RBP eCLIP15.3■□□□□ 0.044e-7■■■■■ 86.2
SEC13-204ENST00000397099 TOM1L1O75674 476 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 RECQL4O94761 1208 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 BRD1O95696 1058 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 MCF2P10911 925 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 PLCG1P19174 1290 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 GRM5P41594 1212 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 AFF1P51825 1210 aaKnown RBP15.3■□□□□ 0.04
SEC13-204ENST00000397099 ELAVL2Q12926 359 aaKnown RBP15.3■□□□□ 0.04
SEC13-204ENST00000397099 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 PTPAQ15257 358 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 PTPN14Q15678 1187 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 KYAT1Q16773 422 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 NT5DC1Q5TFE4 455 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 ANKRD54Q6NXT1 300 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 PDXDC1Q6P996 788 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 CDR2LQ86X02 465 aaPredicted RBP15.3■□□□□ 0.04
SEC13-204ENST00000397099 TMEM161BQ8NDZ6 487 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 LARP4BQ92615 738 aaKnown RBP15.3■□□□□ 0.04
SEC13-204ENST00000397099 RAD54LQ92698 747 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 FAM122AQ96E09 287 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 UROC1Q96N76 676 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 NECTIN4Q96NY8 510 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 TCHPQ9BT92 498 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 HERC2P3Q9BVR0 1158 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 PARVGQ9HBI0 331 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 SNTG2Q9NY99 539 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 MUTYHQ9UIF7 546 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 ADAM28Q9UKQ2 775 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 MYH15Q9Y2K3 1946 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 CLIC4Q9Y696 253 aa15.3■□□□□ 0.04
SEC13-204ENST00000397099 CITO14578 2027 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 PRR33A8MZF0 331 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 SLC16A4O15374 487 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 CLASP2O75122 1294 aaKnown RBP15.29■□□□□ 0.04
SEC13-204ENST00000397099 KRT18P05783 430 aaKnown RBP15.29■□□□□ 0.04
SEC13-204ENST00000397099 ADH1AP07327 375 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 MAPTP10636 758 aaKnown RBP15.29■□□□□ 0.04
SEC13-204ENST00000397099 GLUD2P49448 558 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 ZNF131P52739 623 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 NCKAP1LP55160 1127 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 USP41Q3LFD5 358 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 ZNF568Q3ZCX4 644 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 ATL3Q6DD88 541 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 KIAA1841Q6NSI8 718 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 MPZL3Q6UWV2 235 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 CCDC73Q6ZRK6 1079 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 GPBP1Q86WP2 473 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 RNF135Q8IUD6 432 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 RNF168Q8IYW5 571 aaPredicted RBP15.29■□□□□ 0.04
SEC13-204ENST00000397099 KRI1Q8N9T8 703 aaKnown RBP15.29■□□□□ 0.04
SEC13-204ENST00000397099 BCL7CQ8WUZ0 217 aaPredicted RBP15.29■□□□□ 0.04
SEC13-204ENST00000397099 APOL5Q9BWW9 433 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 PTPRHQ9HD43 1115 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 SLC38A7Q9NVC3 462 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 MIOSQ9NXC5 875 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 FBXO2Q9UK22 296 aaPredicted RBP15.29■□□□□ 0.04
SEC13-204ENST00000397099 PRG3Q9Y2Y8 225 aaPredicted RBP15.29■□□□□ 0.04
SEC13-204ENST00000397099 HCFC2Q9Y5Z7 792 aa15.29■□□□□ 0.04
SEC13-204ENST00000397099 TTLL13PA6NNM8 815 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 B4GALT3O60512 393 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 TBCAO75347 108 aaKnown RBP15.28■□□□□ 0.04
SEC13-204ENST00000397099 TADA2AO75478 443 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 FAM13AO94988 1023 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 EFEMP2O95967 443 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 PROZP22891 400 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 NASPP49321 788 aaPredicted RBP15.28■□□□□ 0.04
SEC13-204ENST00000397099 DSG1Q02413 1049 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 HSP90AA2PQ14568 343 aaPredicted RBP15.28■□□□□ 0.04
SEC13-204ENST00000397099 KARSQ15046 597 aaKnown RBP15.28■□□□□ 0.04
SEC13-204ENST00000397099 ARSHQ5FYA8 562 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 RRAGBQ5VZM2 374 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 EEF1DP3Q658K8 133 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 CYP26C1Q6V0L0 522 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 HDAC7Q8WUI4 952 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 SUSD6Q92537 303 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 RPGRIP1Q96KN7 1286 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 ACAP3Q96P50 834 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 TSPAN18Q96SJ8 248 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 PLIN2Q99541 437 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 PHF7Q9BWX1 381 aaPredicted RBP15.28■□□□□ 0.04
SEC13-204ENST00000397099 POLD4Q9HCU8 107 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 CHST7Q9NS84 486 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 BLOC1S4Q9NUP1 217 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 MARCH5Q9NX47 278 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 KLK14Q9P0G3 267 aa15.28■□□□□ 0.04
SEC13-204ENST00000397099 SFI1A8K8P3 1242 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 TMEM189-UBE2V1I3L0A0 370 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 CLDN3O15551 220 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 TRAPPC3O43617 180 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 LILRB3O75022 631 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 KLRC2P26717 231 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 MARCKSP29966 332 aaPredicted RBP15.27■□□□□ 0.04
SEC13-204ENST00000397099 PLA2G5P39877 138 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 MTHFRP42898 656 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 RAD51AP2Q09MP3 1159 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms