RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 SOAT1P35610 550 aa18.45■□□□□ 0.54
MCF2L-208ENST00000397030 GRAMD1BQ3KR37 738 aa18.45■□□□□ 0.54
MCF2L-208ENST00000397030 WDR72Q3MJ13 1102 aa18.45■□□□□ 0.54
MCF2L-208ENST00000397030 ASAP3Q8TDY4 903 aa18.45■□□□□ 0.54
MCF2L-208ENST00000397030 APOL5Q9BWW9 433 aa18.45■□□□□ 0.54
MCF2L-208ENST00000397030 KLK14Q9P0G3 267 aa18.45■□□□□ 0.54
MCF2L-208ENST00000397030 USP6P35125 1406 aa18.45■□□□□ 0.54
MCF2L-208ENST00000397030 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
MCF2L-208ENST00000397030 CDC42BPGQ6DT37 1551 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 CYP2C9P11712 490 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 GPS1Q13098 491 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 UNC13DQ70J99 1090 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 GFAPP14136 432 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 HARS2P49590 506 aaKnown RBP18.44■□□□□ 0.54
MCF2L-208ENST00000397030 KCNB1Q14721 858 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 PFKFB3Q16875 520 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-208ENST00000397030 NFKBIZQ9BYH8 718 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 DCP1AQ9NPI6 582 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-208ENST00000397030 E2F8A0AVK6 867 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 IFNAR1P17181 557 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 AARSP49588 968 aaKnown RBP eCLIP18.44■□□□□ 0.54
MCF2L-208ENST00000397030 MORF4L2Q15014 288 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 DGKHQ86XP1 1220 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 LRRC37BQ96QE4 947 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 NFKBIL1Q9UBC1 381 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-208ENST00000397030 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 PKP3Q9Y446 797 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 TDP2O95551 362 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 SOX11P35716 441 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 RHOT2Q8IXI1 618 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 CLMNQ96JQ2 1002 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-208ENST00000397030 RGS12O14924 1447 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 ITIH6Q6UXX5 1313 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 CCDC85CA6NKD9 419 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 KYAT1Q16773 422 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 CDKL3Q8IVW4 592 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-208ENST00000397030 OXER1Q8TDS5 423 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 LATS2Q9NRM7 1088 aa18.44■□□□□ 0.54
MCF2L-208ENST00000397030 TRIM49P0CI25 452 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 TRIM49CP0CI26 452 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 CYP19A1P11511 503 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-208ENST00000397030 STN1Q9H668 368 aaKnown RBP18.43■□□□□ 0.54
MCF2L-208ENST00000397030 TMEM161AQ9NX61 479 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 GRAP2O75791 330 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 EPHB4P54760 987 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 SNCBQ16143 134 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 ELMO2Q96JJ3 720 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 APOBEC2Q9Y235 224 aaKnown RBP18.43■□□□□ 0.54
MCF2L-208ENST00000397030 SNX24Q9Y343 169 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 CYP27B1O15528 508 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 PRR23CQ6ZRP0 262 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 C10orf53Q8N6V4 93 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 TMEM39BQ9GZU3 492 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 YY1P25490 414 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 AMHR2Q16671 573 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 EFCAB12Q6NXP0 572 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 SPATA16Q9BXB7 569 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 FAM49BQ9NUQ9 324 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 ADGRA2Q96PE1 1338 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 APOA4P06727 396 aa18.43■□□□□ 0.54
MCF2L-208ENST00000397030 HERC5Q9UII4 1024 aaKnown RBP18.43■□□□□ 0.54
MCF2L-208ENST00000397030 A0A1W2PQ27 194 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 A0A1W2PQ64 194 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 A0A1W2PQD8 194 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 KPNA1P52294 538 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-208ENST00000397030 NEK9Q8TD19 979 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 ING2Q9H160 280 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 KRT87PA6NCN2 255 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 UBE3AQ05086 875 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 CDH18Q13634 790 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 SGO1Q5FBB7 561 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 TBC1D16Q8TBP0 767 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 HIF1AQ16665 826 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 KNOP1Q1ED39 458 aaKnown RBP18.42■□□□□ 0.54
MCF2L-208ENST00000397030 CYP4A22Q5TCH4 519 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 TTC13Q8NBP0 860 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 SLC7A14Q8TBB6 771 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 MTBPQ96DY7 904 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 NRBF2Q96F24 287 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 PBRM1Q86U86 1689 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 SETD1BQ9UPS6 1966 aaKnown RBP18.42■□□□□ 0.54
MCF2L-208ENST00000397030 PER1O15534 1290 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-208ENST00000397030 KCNN4O15554 427 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 HSPA1AP0DMV8 641 aaKnown RBP18.42■□□□□ 0.54
MCF2L-208ENST00000397030 HSPA1BP0DMV9 641 aaKnown RBP18.42■□□□□ 0.54
MCF2L-208ENST00000397030 TJAP1Q5JTD0 557 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 FAM20AQ96MK3 541 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 EMSYQ7Z589 1322 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 ATP7BP35670 1465 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 ZNF445P59923 1031 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 NR1H3Q13133 447 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 TBC1D1Q86TI0 1168 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-208ENST00000397030 MLXIPLQ9NP71 852 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 PTCH1Q13635 1447 aa18.42■□□□□ 0.54
MCF2L-208ENST00000397030 SESN2P58004 480 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-208ENST00000397030 KCNH2Q12809 1159 aa18.41■□□□□ 0.54
MCF2L-208ENST00000397030 TDRD10Q5VZ19 366 aaKnown RBP18.41■□□□□ 0.54
MCF2L-208ENST00000397030 DCP1BQ8IZD4 617 aaKnown RBP18.41■□□□□ 0.54
MCF2L-208ENST00000397030 TDRD7Q8NHU6 1098 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms