RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ATP12AP54707 1039 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 PTH1RQ03431 593 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 POTEEQ6S8J3 1075 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 NEK10Q6ZWH5 1172 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 THTPAQ9BU02 230 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 ADAM30Q9UKF2 790 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 HPS5Q9UPZ3 1129 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 LINC00854A0A1B0GVQ3 168 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 SRP72O76094 671 aaKnown RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 KCTD2Q14681 263 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 NCAPHQ15003 741 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF564Q8TBZ8 553 aaPredicted RBP10.88□□□□□ -0.67
COL4A4-201ENST00000396625 RAD21L1Q9H4I0 556 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 RWDD3Q9Y3V2 267 aa10.88□□□□□ -0.67
COL4A4-201ENST00000396625 APOL1O14791 398 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 KRT6AP02538 564 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 KRT6BP04259 564 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 APOA4P06727 396 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 KRT6CP48668 564 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 CALML6Q8TD86 181 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 IL1RL2Q9HB29 575 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 PRKAG2Q9UGJ0 569 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 KLHL20Q9Y2M5 609 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 PBRM1Q86U86 1689 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 GOLGA8JA6NMD2 632 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 UBAP1LF5GYI3 381 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 SGSM1Q2NKQ1 1148 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 SYTL3Q4VX76 610 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 TTC23LQ6PF05 361 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 PDCD10Q9BUL8 212 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 WDR11Q9BZH6 1224 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 MORC2Q9Y6X9 1032 aaPredicted RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 ESYT3A0FGR9 886 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 CSE1LP55060 971 aaKnown RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 ANKRD40Q6AI12 368 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 ZBTB10Q96DT7 871 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 HIC2Q96JB3 615 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 MAML3Q96JK9 1138 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 LBHD1Q9BQE6 289 aaPredicted RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 FAM129AQ9BZQ8 928 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 SERHL2Q9H4I8 314 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 SERHLQ9NQF3 203 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 MYL2P10916 166 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 SOX11P35716 441 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 TALDO1P37837 337 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 CTCFP49711 727 aaPredicted RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 SCNN1DP51172 638 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 COBLL1Q53SF7 1204 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 EPS8L2Q9H6S3 715 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 VIPAS39Q9H9C1 493 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 SERPINB13Q9UIV8 391 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 GPATCH8Q9UKJ3 1502 aaKnown RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 INAQ16352 499 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 DTNAQ9Y4J8 743 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 TPP2P29144 1249 aaPredicted RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 PDAP1Q13442 181 aaKnown RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 KLHL17Q6TDP4 642 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 G2E3Q7L622 706 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 FOPNLQ96NB1 174 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 DNAJC7Q99615 494 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 TRIM39Q9HCM9 518 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 DDX56Q9NY93 547 aaKnown RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 ADAMTS1Q9UHI8 967 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 USP15Q9Y4E8 981 aaPredicted RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 TRAPPC8Q9Y2L5 1435 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 URB1O60287 2271 aaKnown RBP10.87□□□□□ -0.67
COL4A4-201ENST00000396625 AIM2O14862 343 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 PLA2G4BP0C869 781 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 MLNP12872 115 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 ALDH1B1P30837 517 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 FAM45BPQ6NSW5 357 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 TMEM270Q6UE05 265 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 THEM5Q8N1Q8 247 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 WNT8AQ9H1J5 351 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 CACNA2D2Q9NY47 1150 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 SLC9A2Q9UBY0 812 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 GGT7Q9UJ14 662 aa10.87□□□□□ -0.67
COL4A4-201ENST00000396625 CFAP99D6REC4 459 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 PDIA3P30101 505 aaKnown RBP10.86□□□□□ -0.67
COL4A4-201ENST00000396625 PLIN5Q00G26 463 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 SLC10A5Q5PT55 438 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 CCDC137Q6PK04 289 aaKnown RBP10.86□□□□□ -0.67
COL4A4-201ENST00000396625 DCUN1D1Q96GG9 259 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 EMILIN3Q9NT22 766 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
COL4A4-201ENST00000396625 USP1O94782 785 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 MEI1Q5TIA1 1274 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 PLEKHA7Q6IQ23 1121 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 PPP1R14AQ96A00 147 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 HDHD2Q9H0R4 259 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 DHX36Q9H2U1 1008 aaKnown RBP10.86□□□□□ -0.67
COL4A4-201ENST00000396625 IPPQ9Y573 584 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF518AQ6AHZ1 1483 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 RNF123Q5XPI4 1314 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 ARSEP51690 589 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 RMDN1Q96DB5 314 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 TSPAN17Q96FV3 270 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 KCNK16Q96T55 309 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms