RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 UAP1Q16222 522 aaPredicted RBP17.83■□□□□ 0.44
TRIM39-205ENST00000396551 GNPTABQ3T906 1256 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 XKR3Q5GH77 459 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 SH2D3CQ8N5H7 860 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 CCDC26Q8TAB7 109 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 HOXC10Q9NYD6 342 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 GPRC5DQ9NZD1 345 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 CALCAP01258 141 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 WNT7BP56706 349 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 CYFIP1Q7L576 1253 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 MAATS1Q7Z4T9 603 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 SGIP1Q9BQI5 828 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 TRIM51Q9BSJ1 452 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 SYNGAP1Q96PV0 1343 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 CDR2Q01850 454 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 EMC2Q15006 297 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRIM39-205ENST00000396551 BICD1Q96G01 975 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 IFT74Q96LB3 600 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 CD2APQ9Y5K6 639 aa17.82■□□□□ 0.44
TRIM39-205ENST00000396551 GRIN3BO60391 1043 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 COMTP21964 271 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 MESDQ14696 234 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 KCTD16Q68DU8 428 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 DLK2Q6UY11 383 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 C15orf39Q6ZRI6 1047 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 BTBD6Q96KE9 485 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 ZSWIM1Q9BR11 485 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 PLAAQ9Y263 795 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 MYPNQ86TC9 1320 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 ATG7O95352 703 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 CYP1A2P05177 515 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 HSD17B3P37058 310 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 SH3D19Q5HYK7 790 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 LMBRD2Q68DH5 695 aaPredicted RBP17.81■□□□□ 0.44
TRIM39-205ENST00000396551 CD101Q93033 1021 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 TMEM143Q96AN5 459 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 HAPLN2Q9GZV7 340 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 MAFBQ9Y5Q3 323 aaPredicted RBP17.81■□□□□ 0.44
TRIM39-205ENST00000396551 A0A0G2JMZ2 1700 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 MIF4GDA9UHW6 222 aaKnown RBP17.81■□□□□ 0.44
TRIM39-205ENST00000396551 PEX5P50542 639 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 ASAP3Q8TDY4 903 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 ATP8B4Q8TF62 1192 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 DPH5Q9H2P9 285 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 TRPC6Q9Y210 931 aa17.81■□□□□ 0.44
TRIM39-205ENST00000396551 USP2O75604 605 aaPredicted RBP17.8■□□□□ 0.44
TRIM39-205ENST00000396551 ICAM3P32942 547 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 PDE6CP51160 858 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 DNAJC21Q5F1R6 531 aaKnown RBP17.8■□□□□ 0.44
TRIM39-205ENST00000396551 TREML2Q5T2D2 321 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 ZDHHC14Q8IZN3 488 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 RPS6KC1Q96S38 1066 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 NUP85Q9BW27 656 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 H0YGN5 161 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 POLGP54098 1239 aaPredicted RBP17.8■□□□□ 0.44
TRIM39-205ENST00000396551 ENPEPQ07075 957 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 STXBP2Q15833 593 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 ZNF564Q8TBZ8 553 aaPredicted RBP17.8■□□□□ 0.44
TRIM39-205ENST00000396551 ZNF653Q96CK0 615 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 CEP89Q96ST8 783 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 ZNF302Q9NR11 478 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 NFS1Q9Y697 457 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 SNCAIPQ9Y6H5 919 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 GRIN2DO15399 1336 aa17.8■□□□□ 0.44
TRIM39-205ENST00000396551 EXTL3O43909 919 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 IRAK1P51617 712 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 GTF3C4Q9UKN8 822 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 OTOFQ9HC10 1997 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 PAPPA2Q9BXP8 1791 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 OATP04181 439 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 IVLP07476 585 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 GLRA2P23416 452 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 LIG4P49917 911 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 NLRP11P59045 1033 aaKnown RBP17.79■□□□□ 0.44
TRIM39-205ENST00000396551 SKOR1P84550 965 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 SEPT14Q6ZU15 432 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 USP37Q86T82 979 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 NLGN2Q8NFZ4 835 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 NAP1L3Q99457 506 aaPredicted RBP17.79■□□□□ 0.44
TRIM39-205ENST00000396551 CAPS2Q9BXY5 557 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 DHX33Q9H6R0 707 aaKnown RBP17.79■□□□□ 0.44
TRIM39-205ENST00000396551 PPP2R3BQ9Y5P8 575 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 PTPRJQ12913 1337 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 CLDN10P78369 228 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 GCNT1Q02742 428 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 UBL4BQ8N7F7 174 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 CHST13Q8NET6 341 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 DNERQ8NFT8 737 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 CNKSR2Q8WXI2 1034 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 GLG1Q92896 1179 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 ZBTB45Q96K62 511 aaPredicted RBP17.79■□□□□ 0.44
TRIM39-205ENST00000396551 TRIM31Q9BZY9 425 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 MAF1Q9H063 256 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 BTBD7Q9P203 1132 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 UTP11Q9Y3A2 253 aaKnown RBP17.79■□□□□ 0.44
TRIM39-205ENST00000396551 STYXL1Q9Y6J8 313 aa17.79■□□□□ 0.44
TRIM39-205ENST00000396551 EDN1P05305 212 aa17.78■□□□□ 0.44
TRIM39-205ENST00000396551 ALDH5A1P51649 535 aaPredicted RBP17.78■□□□□ 0.44
TRIM39-205ENST00000396551 PSMD6Q15008 389 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms