RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 FAM76AQ8TAV0 307 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 DDX1Q92499 740 aaKnown RBP18.07■□□□□ 0.48
NUP50-202ENST00000396096 BICD1Q96G01 975 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 RNPC3Q96LT9 517 aaKnown RBP18.07■□□□□ 0.48
NUP50-202ENST00000396096 ZIM3Q96PE6 472 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 GOLGA6CA6NDK9 693 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 MMEP08473 750 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 GOLGA6DP0CG33 693 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 ARL2P36404 184 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 PDE6CP51160 858 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 PTENP60484 403 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 CNTN2Q02246 1040 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 CFAP58Q5T655 872 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 ANKRD35Q8N283 1001 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 C1orf131Q8NDD1 294 aaKnown RBP18.07■□□□□ 0.48
NUP50-202ENST00000396096 NLGN2Q8NFZ4 835 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 ZNF526Q8TF50 670 aaPredicted RBP18.07■□□□□ 0.48
NUP50-202ENST00000396096 PSPC1Q8WXF1 523 aaKnown RBP18.07■□□□□ 0.48
NUP50-202ENST00000396096 PIK3R5Q8WYR1 880 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 RUFY1Q96T51 708 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 FAM213AQ9BRX8 229 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 PLEKHA4Q9H4M7 779 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 GOLGA6AQ9NYA3 693 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 GTF3C4Q9UKN8 822 aa18.07■□□□□ 0.48
NUP50-202ENST00000396096 SBF1O95248 1867 aa18.06■□□□□ 0.48
NUP50-202ENST00000396096 LIG4P49917 911 aa18.06■□□□□ 0.48
NUP50-202ENST00000396096 R3HDM1Q15032 1099 aaKnown RBP18.06■□□□□ 0.48
NUP50-202ENST00000396096 TREML2Q5T2D2 321 aa18.06■□□□□ 0.48
NUP50-202ENST00000396096 UBL4BQ8N7F7 174 aa18.06■□□□□ 0.48
NUP50-202ENST00000396096 ALG3Q92685 438 aa18.06■□□□□ 0.48
NUP50-202ENST00000396096 GRIN3BO60391 1043 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 SHOX2O60902 331 aaPredicted RBP18.05■□□□□ 0.48
NUP50-202ENST00000396096 DLATP10515 647 aaKnown RBP18.05■□□□□ 0.48
NUP50-202ENST00000396096 HSPA6P17066 643 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 GLRA2P23416 452 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 RFC5P40937 340 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 HNRNPH2P55795 449 aaKnown RBP18.05■□□□□ 0.48
NUP50-202ENST00000396096 FSTL1Q12841 308 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 STRN3Q13033 797 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 ZSCAN26Q16670 478 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 ASAP3Q8TDY4 903 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 ZNF516Q92618 1163 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 TATDN2Q93075 761 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 ZSWIM1Q9BR11 485 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 WNT8AQ9H1J5 351 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 BTBD7Q9P203 1132 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 UVRAGQ9P2Y5 699 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 AMACRQ9UHK6 382 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 GUCY2FP51841 1108 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 TARBP2Q15633 366 aaKnown RBP18.05■□□□□ 0.48
NUP50-202ENST00000396096 ZACNQ401N2 412 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 SLFN12LQ6IEE8 588 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 LEKR1Q6ZMV7 388 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 CD101Q93033 1021 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 FAM114A2Q9NRY5 505 aa18.05■□□□□ 0.48
NUP50-202ENST00000396096 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.05■□□□□ 0.48
NUP50-202ENST00000396096 GOLGA6L10A0A0M3HER8 536 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 GSTTP1A0A1W2PQM5 241 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 SORBS3O60504 671 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 UBA1P22314 1058 aaKnown RBP18.04■□□□□ 0.48
NUP50-202ENST00000396096 PEX5P50542 639 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 TTMPQ5BVD1 217 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 ACAD10Q6JQN1 1059 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 LRIG3Q6UXM1 1119 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 SEPT14Q6ZU15 432 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 DHX38Q92620 1227 aaKnown RBP18.04■□□□□ 0.48
NUP50-202ENST00000396096 TMEM143Q96AN5 459 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 PCYT2Q99447 389 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 TMEM134Q9H6X4 195 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 ACP6Q9NPH0 428 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 AGO2Q9UKV8 859 aaKnown RBP18.04■□□□□ 0.48
NUP50-202ENST00000396096 PPME1Q9Y570 386 aa18.04■□□□□ 0.48
NUP50-202ENST00000396096 SOWAHBA6NEL2 793 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 TTI1O43156 1089 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 FARP2O94887 1054 aaPredicted RBP18.03■□□□□ 0.48
NUP50-202ENST00000396096 GGPS1O95749 300 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 C4BPAP04003 597 aaKnown RBP18.03■□□□□ 0.48
NUP50-202ENST00000396096 CTNNA2P26232 953 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 PRKG1Q13976 671 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 HLTFQ14527 1009 aaKnown RBP eCLIP18.03■□□□□ 0.48
NUP50-202ENST00000396096 CLEC16AQ2KHT3 1053 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.03■□□□□ 0.48
NUP50-202ENST00000396096 ZNF677Q86XU0 584 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 PROCA1Q8NCQ7 364 aaPredicted RBP18.03■□□□□ 0.48
NUP50-202ENST00000396096 DEPTORQ8TB45 409 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 SLC7A3Q8WY07 619 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 ARL8AQ96BM9 186 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 LRRC45Q96CN5 670 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.03■□□□□ 0.489e-9■■■■■ 111.8
NUP50-202ENST00000396096 C1orf112Q9NSG2 853 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 TRPC6Q9Y210 931 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 NR2E1Q9Y466 385 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 FAM187AA6NFU0 413 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 LDHAP00338 332 aaKnown RBP18.03■□□□□ 0.48
NUP50-202ENST00000396096 TGFB3P10600 412 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 COMTP21964 271 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 DHX34Q14147 1143 aaKnown RBP18.03■□□□□ 0.48
NUP50-202ENST00000396096 NEDD9Q14511 834 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 CRELD2Q6UXH1 353 aaPredicted RBP18.03■□□□□ 0.48
NUP50-202ENST00000396096 ZNF564Q8TBZ8 553 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms