RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 HSPA9P38646 679 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 OCA2Q04671 838 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 CELF1Q92879 486 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 NAF1Q96HR8 494 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SMARCAD1Q9H4L7 1026 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ABCF3Q9NUQ8 709 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 USP42Q9H9J4 1324 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 TTC26A0AVF1 554 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF197O14709 1029 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 GAS2O43903 313 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 KRT14P02533 472 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 KITP10721 976 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ACCSLQ4AC99 568 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 XKR3Q5GH77 459 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 RARS2Q5T160 578 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 TRAPPC11Q7Z392 1133 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 EXT2Q93063 718 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 GOLPH3LQ9H4A5 285 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 GPBP1L1Q9HC44 474 aaPredicted RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 UVRAGQ9P2Y5 699 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SMG5Q9UPR3 1016 aaKnown RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 ATF5Q9Y2D1 282 aaPredicted RBP5.77□□□□□ -1.49
VPS13C-204ENST00000395898 SNX24Q9Y343 169 aa5.77□□□□□ -1.49
VPS13C-204ENST00000395898 STK25O00506 426 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 NMT2O60551 498 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 CDH6P55285 790 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 FBXW4P57775 412 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 E2F5Q15329 346 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 HABP4Q5JVS0 413 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 BTBD8Q5XKL5 378 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 CRAMP1Q96RY5 1269 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 CYTH2Q99418 400 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 AGPAT1Q99943 283 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 C11orf70Q9BRQ4 267 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 TEX13BQ9BXU2 312 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ZFATQ9P243 1243 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 TTC7AQ9ULT0 858 aaPredicted RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 CYBBP04839 570 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 GRIK1P39086 918 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ARSEP51690 589 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 KCNA1Q09470 495 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SBK1Q52WX2 424 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 C12orf60Q5U649 245 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 C4orf22Q6V702 233 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ANO5Q75V66 913 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 FAM84BQ96KN1 310 aaPredicted RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 DHX35Q9H5Z1 703 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 CDV3Q9UKY7 258 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 PDS5AQ29RF7 1337 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 MAGEB2O15479 319 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 RABL6Q3YEC7 729 aaPredicted RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 C1orf146Q5VVC0 180 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ZC3H18Q86VM9 953 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 RASSF3Q86WH2 238 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF677Q86XU0 584 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SPATA4Q8NEY3 305 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF526Q8TF50 670 aaPredicted RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 NSUN4Q96CB9 384 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 FOXP3Q9BZS1 431 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 TCHHQ07283 1943 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 STAT5BP51692 787 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 HDAC4P56524 1084 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 PDIA2Q13087 525 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 UGP2Q16851 508 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 FAM182BQ5T319 152 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 LRRC8BQ6P9F7 803 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 RRM2BQ7LG56 351 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ZBED8Q8IZ13 594 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 TBC1D19Q8N5T2 526 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF280CQ8ND82 737 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 STKLD1Q8NE28 680 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 PPP2R3CQ969Q6 453 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ARHGEF26Q96DR7 871 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 RNPC3Q96LT9 517 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 EGFL8Q99944 293 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 C7orf25Q9BPX7 421 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 GJB4Q9NTQ9 266 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SSU72P8A0A1W2PR75 194 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 UBA6A0AVT1 1052 aaPredicted RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SRGAP2O75044 1071 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SYF2O95926 243 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 CPB1P15086 417 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SGSM1Q2NKQ1 1148 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 TKFCQ3LXA3 575 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 RIBC1Q8N443 379 aaPredicted RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 PGBD4Q96DM1 585 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SLC38A7Q9NVC3 462 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 MRFAP1Q9Y605 127 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 TNPO2O14787 897 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 CHUKO15111 745 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 APRTP07741 180 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SERPINB4P48594 390 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 PRUNE1Q86TP1 453 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 MFN1Q8IWA4 741 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 PPM1NQ8N819 430 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 APPL2Q8NEU8 664 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 OR6P1Q8NGX9 317 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 RNF25Q96BH1 459 aaPredicted RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 COG4Q9H9E3 785 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ADA2Q9NZK5 511 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms