RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 FUT10Q6P4F1 479 aa25.29■■□□□ 1.64
PMS2P3-201ENST00000394921 TIPINQ9BVW5 301 aa25.29■■□□□ 1.64
PMS2P3-201ENST00000394921 NT5C3AQ9H0P0 336 aa25.29■■□□□ 1.64
PMS2P3-201ENST00000394921 POMKQ9H5K3 350 aa25.29■■□□□ 1.64
PMS2P3-201ENST00000394921 RXFP1Q9HBX9 757 aa25.29■■□□□ 1.64
PMS2P3-201ENST00000394921 CHST7Q9NS84 486 aa25.29■■□□□ 1.64
PMS2P3-201ENST00000394921 TNFSF13BQ9Y275 285 aa25.29■■□□□ 1.64
PMS2P3-201ENST00000394921 SFI1A8K8P3 1242 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 WEE2P0C1S8 567 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 SLC12A3P55017 1021 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 DSG1Q02413 1049 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 CABP7Q86V35 215 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 LRRC15Q8TF66 581 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 FBXL18Q96ME1 805 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 NECTIN4Q96NY8 510 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 ACO2Q99798 780 aaKnown RBP25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 C17orf75Q9HAS0 396 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 PTPRHQ9HD43 1115 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 KMT5AQ9NQR1 393 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 ADAM28Q9UKQ2 775 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 GDAQ9Y2T3 454 aa25.28■■□□□ 1.64
PMS2P3-201ENST00000394921 TEX28O15482 410 aa25.27■■□□□ 1.64
PMS2P3-201ENST00000394921 PLA2G4BP0C869 781 aa25.27■■□□□ 1.64
PMS2P3-201ENST00000394921 GRIN1Q05586 938 aa25.27■■□□□ 1.64
PMS2P3-201ENST00000394921 B3GALT6Q96L58 329 aa25.27■■□□□ 1.64
PMS2P3-201ENST00000394921 AK8Q96MA6 479 aa25.27■■□□□ 1.64
PMS2P3-201ENST00000394921 DAXXQ9UER7 740 aaPredicted RBP25.27■■□□□ 1.64
PMS2P3-201ENST00000394921 SSX2IPQ9Y2D8 614 aa25.27■■□□□ 1.64
PMS2P3-201ENST00000394921 VPS37CA5D8V6 355 aaPredicted RBP25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 CASTOR2A6NHX0 329 aa25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 THP07101 528 aa25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 MTHFRP42898 656 aa25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 RAD51AP2Q09MP3 1159 aa25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 HSP90AA2PQ14568 343 aaPredicted RBP25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 KIAA1841Q6NSI8 718 aa25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 EDAQ92838 391 aa25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 CDK5RAP3Q96JB5 506 aa25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 NTPCRQ9BSD7 190 aaKnown RBP25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 CDT1Q9H211 546 aa25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 RBM19Q9Y4C8 960 aaKnown RBP25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 DENND4AQ7Z401 1863 aa25.26■■□□□ 1.63
PMS2P3-201ENST00000394921 C2orf16Q68DN1 1984 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 ABLIM1O14639 778 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 SLC16A4O15374 487 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 SLC26A4O43511 780 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 BMP15O95972 392 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 SF3A1Q15459 793 aaKnown RBP25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 ARSHQ5FYA8 562 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 TMC5Q6UXY8 1006 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 CEP120Q8N960 986 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 SPIRE2Q8WWL2 714 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 RIPOR3Q96MK2 946 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 TARS2Q9BW92 718 aaKnown RBP25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 MRPL4Q9BYD3 311 aaKnown RBP25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 SFXN1Q9H9B4 322 aa25.25■■□□□ 1.63
PMS2P3-201ENST00000394921 MYO10Q9HD67 2058 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 NPHP3-ACAD11A0A0J9YXS1 232 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 TADA2AO75478 443 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 KIF4AO95239 1232 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 ADH1AP07327 375 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 PLS3P13797 630 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 PDCP20941 246 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 PROZP22891 400 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 SP100P23497 879 aaPredicted RBP25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 USP41Q3LFD5 358 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 GPR65Q8IYL9 337 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 KCND2Q9NZV8 630 aa25.24■■□□□ 1.63
PMS2P3-201ENST00000394921 MTCL1Q9Y4B5 1905 aaKnown RBP25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 GRM5P41594 1212 aa25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 ZNF568Q3ZCX4 644 aa25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 ATAT1Q5SQI0 421 aa25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 APBB1IPQ7Z5R6 666 aaPredicted RBP25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 GPR149Q86SP6 731 aa25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 TMEM161BQ8NDZ6 487 aa25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 HASPINQ8TF76 798 aa25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 PPP1R10Q96QC0 940 aaKnown RBP25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 BLOC1S4Q9NUP1 217 aa25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 VWA8A3KMH1 1905 aa25.23■■□□□ 1.63
PMS2P3-201ENST00000394921 SF3B1O75533 1304 aaKnown RBP eCLIP25.22■■□□□ 1.636e-7■■■■■ 71.8
PMS2P3-201ENST00000394921 C2CD4DB7Z1M9 353 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 SYT1P21579 422 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 LONP1P36776 959 aaKnown RBP25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 UBA7P41226 1012 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 ZXDAP98168 799 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 CACNB1Q02641 598 aaPredicted RBP25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 RESTQ13127 1097 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 PTPAQ15257 358 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 GLRA4Q5JXX5 417 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 RIN2Q8WYP3 895 aaPredicted RBP25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 MAN1C1Q9NR34 630 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 TSHZ2Q9NRE2 1034 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 NR2E1Q9Y466 385 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 CITO14578 2027 aa25.22■■□□□ 1.63
PMS2P3-201ENST00000394921 ZNF318Q5VUA4 2279 aa25.21■■□□□ 1.63
PMS2P3-201ENST00000394921 BRD1O95696 1058 aa25.21■■□□□ 1.63
PMS2P3-201ENST00000394921 MAPTP10636 758 aaKnown RBP25.21■■□□□ 1.63
PMS2P3-201ENST00000394921 XKR4Q5GH76 650 aa25.21■■□□□ 1.63
PMS2P3-201ENST00000394921 RTP2Q5QGT7 225 aa25.21■■□□□ 1.63
PMS2P3-201ENST00000394921 ALKAL1Q6UXT8 129 aa25.21■■□□□ 1.63
PMS2P3-201ENST00000394921 CALML4Q96GE6 196 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms