RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 HAPLN2Q9GZV7 340 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 SMOC2Q9H3U7 446 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 UBN1Q9NPG3 1134 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 BLOC1S4Q9NUP1 217 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 PARP2Q9UGN5 583 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 SMC3Q9UQE7 1217 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 NR2E1Q9Y466 385 aa9.77□□□□□ -0.85
ATG4A-205ENST00000394892 VWA3AA6NCI4 1184 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 CASTOR2A6NHX0 329 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 LAD1O00515 517 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 C2CD2LO14523 706 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 N4BP3O15049 544 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 ADAM12O43184 909 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 N4BP1O75113 896 aaKnown RBP9.76□□□□□ -0.85
ATG4A-205ENST00000394892 RPL17P18621 184 aaKnown RBP9.76□□□□□ -0.85
ATG4A-205ENST00000394892 PROZP22891 400 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 AVPR2P30518 371 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 CA8P35219 290 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 SOX4Q06945 474 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-205ENST00000394892 RAD51AP2Q09MP3 1159 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 TCF15Q12870 199 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 GRIK3Q13003 919 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 PTPAQ15257 358 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 MAPK6Q16659 721 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 TPRNQ4KMQ1 711 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 RTP2Q5QGT7 225 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 KRT79Q5XKE5 535 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 LARP1BQ659C4 914 aaKnown RBP9.76□□□□□ -0.85
ATG4A-205ENST00000394892 CES5AQ6NT32 575 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 FUT10Q6P4F1 479 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 FAM173BQ6P4H8 233 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 LILRA6Q6PI73 481 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 ALKAL1Q6UXT8 129 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 TMC5Q6UXY8 1006 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 ZBTB8OSQ8IWT0 167 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 SYT2Q8N9I0 419 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-205ENST00000394892 TMEM87AQ8NBN3 555 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 DEPTORQ8TB45 409 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 KIFAP3Q92845 792 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 ZNF707Q96C28 371 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-205ENST00000394892 ZMAT2Q96NC0 199 aaKnown RBP9.76□□□□□ -0.85
ATG4A-205ENST00000394892 PPP1R10Q96QC0 940 aaKnown RBP9.76□□□□□ -0.85
ATG4A-205ENST00000394892 PHOX2BQ99453 314 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 ACO2Q99798 780 aaKnown RBP9.76□□□□□ -0.85
ATG4A-205ENST00000394892 TARS2Q9BW92 718 aaKnown RBP9.76□□□□□ -0.85
ATG4A-205ENST00000394892 C2orf40Q9H1Z8 148 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 CDT1Q9H211 546 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 DNM3Q9UQ16 869 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 GDAQ9Y2T3 454 aa9.76□□□□□ -0.85
ATG4A-205ENST00000394892 ZMYM2Q9UBW7 1377 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 TECTAO75443 2155 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 SLC16A4O15374 487 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 RFPL2O75678 378 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 KIF4AO95239 1232 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 PAPLNO95428 1278 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 SPATA31D3P0C874 917 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 GUCY2CP25092 1073 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 MCM2P49736 904 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 NCBP1Q09161 790 aaKnown RBP9.75□□□□□ -0.85
ATG4A-205ENST00000394892 RESTQ13127 1097 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 ZRSR1Q15695 479 aaKnown RBP9.75□□□□□ -0.85
ATG4A-205ENST00000394892 XKR4Q5GH76 650 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 GLRA4Q5JXX5 417 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 ATF7IP2Q5U623 682 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 ARL6IP4Q66PJ3 421 aaKnown RBP9.75□□□□□ -0.85
ATG4A-205ENST00000394892 PRSS55Q6UWB4 352 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-205ENST00000394892 RSPO2Q6UXX9 243 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-205ENST00000394892 SPATA31D4Q6ZUB0 917 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 GPR149Q86SP6 731 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 UBALD2Q8IYN6 164 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 C3orf58Q8NDZ4 430 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 TMEM161BQ8NDZ6 487 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 HASPINQ8TF76 798 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 ASIC4Q96FT7 647 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 NECTIN4Q96NY8 510 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 FAM193BQ96PV7 902 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-205ENST00000394892 FIZ1Q96SL8 496 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 NTPCRQ9BSD7 190 aaKnown RBP9.75□□□□□ -0.85
ATG4A-205ENST00000394892 TRIM6Q9C030 488 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-205ENST00000394892 GOLGA2P5Q9HBQ8 144 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 ADAM28Q9UKQ2 775 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 TNFSF13BQ9Y275 285 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 CLIC4Q9Y696 253 aa9.75□□□□□ -0.85
ATG4A-205ENST00000394892 CCDC169A6NNP5 214 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 H3BQV1 296 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 K7ERI5 159 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 BRD1O95696 1058 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 PDGFBP01127 241 aaPredicted RBP9.74□□□□□ -0.85
ATG4A-205ENST00000394892 ASGR2P07307 311 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 PLA2G4BP0C869 781 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 MAPTP10636 758 aaKnown RBP9.74□□□□□ -0.85
ATG4A-205ENST00000394892 KLRC2P26717 231 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 GLUD2P49448 558 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 EFNA5P52803 228 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 ITIH3Q06033 890 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 TUSC3Q13454 348 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 MTMR3Q13615 1198 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 GIT2Q14161 759 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 HSP90AA2PQ14568 343 aaPredicted RBP9.74□□□□□ -0.85
ATG4A-205ENST00000394892 PPP2R5AQ15172 486 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms