RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 PIM1P11309 404 aaPredicted RBP23.26■■□□□ 1.31
CLDND1-202ENST00000394180 CTNNA2P26232 953 aa23.26■■□□□ 1.31
CLDND1-202ENST00000394180 RPL21P46778 160 aaKnown RBP23.26■■□□□ 1.31
CLDND1-202ENST00000394180 PPP4R3CPQ6ZMV5 832 aa23.26■■□□□ 1.31
CLDND1-202ENST00000394180 MYLK4Q86YV6 388 aaPredicted RBP23.26■■□□□ 1.31
CLDND1-202ENST00000394180 TTC8Q8TAM2 541 aa23.26■■□□□ 1.31
CLDND1-202ENST00000394180 RFFLQ8WZ73 363 aa23.26■■□□□ 1.31
CLDND1-202ENST00000394180 PFASO15067 1338 aa23.26■■□□□ 1.31
CLDND1-202ENST00000394180 MIF4GDA9UHW6 222 aaKnown RBP23.25■■□□□ 1.31
CLDND1-202ENST00000394180 TMEM253P0C7T8 217 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 BRAFP15056 766 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 CDK7P50613 346 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 PRELPP51888 382 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 GSTO1P78417 241 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 RRP1BQ14684 758 aaKnown RBP23.25■■□□□ 1.31
CLDND1-202ENST00000394180 CYP1B1Q16678 543 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 NME8Q8N427 588 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 MAML3Q96JK9 1138 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 SYNCQ9H7C4 482 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 MYMKA6NI61 221 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 ATP9BO43861 1147 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 PABPC4LP0CB38 370 aaKnown RBP23.25■■□□□ 1.31
CLDND1-202ENST00000394180 TARSP26639 723 aaKnown RBP23.25■■□□□ 1.31
CLDND1-202ENST00000394180 SLCO1A2P46721 670 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 HADHBP55084 474 aaKnown RBP23.25■■□□□ 1.31
CLDND1-202ENST00000394180 DPY19L2P1Q6NXN4 242 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 ZC3H18Q86VM9 953 aaKnown RBP23.25■■□□□ 1.31
CLDND1-202ENST00000394180 RIBC1Q8N443 379 aaPredicted RBP23.25■■□□□ 1.31
CLDND1-202ENST00000394180 PPP1R12CQ9BZL4 782 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 ASCC2Q9H1I8 757 aaPredicted RBP23.25■■□□□ 1.31
CLDND1-202ENST00000394180 GOLPH3Q9H4A6 298 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 UBN1Q9NPG3 1134 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 DNAJB4Q9UDY4 337 aa23.25■■□□□ 1.31
CLDND1-202ENST00000394180 A8MXQ7 604 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 ENTPD5O75356 428 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 LYNP07948 512 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 EPHB2P29323 1055 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 EPS15P42566 896 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 BTDP43251 543 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 SULT2A1Q06520 285 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 NR1H3Q13133 447 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 ANKRD35Q8N283 1001 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 MGARPQ8TDB4 240 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 SH3RF3Q8TEJ3 882 aaPredicted RBP23.24■■□□□ 1.31
CLDND1-202ENST00000394180 HIC2Q96JB3 615 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 BLOC1S4Q9NUP1 217 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 NR2E1Q9Y466 385 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 SMIM22K7EJ46 135 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 CCDC22O60826 627 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 MUTP22033 750 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 TMED1Q13445 227 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 ITGA9Q13797 1035 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 KRT25Q7Z3Z0 450 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 LARP4BQ92615 738 aaKnown RBP23.24■■□□□ 1.31
CLDND1-202ENST00000394180 KCNK9Q9NPC2 374 aa23.24■■□□□ 1.31
CLDND1-202ENST00000394180 ZNF646O15015 1829 aaPredicted RBP23.24■■□□□ 1.31
CLDND1-202ENST00000394180 UMODL1Q5DID0 1318 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 TRAF5O00463 557 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 VCAM1P19320 739 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 KHDC1Q4VXA5 237 aaKnown RBP23.23■■□□□ 1.31
CLDND1-202ENST00000394180 DCAF12L1Q5VU92 463 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 CCNJLQ8IV13 435 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 NIM1KQ8IY84 436 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 GLG1Q92896 1179 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 IQCGQ9H095 443 aaKnown RBP23.23■■□□□ 1.31
CLDND1-202ENST00000394180 DAGLAQ9Y4D2 1042 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 PCDHAC2Q9Y5I4 1007 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 SMIM31A0A1B0GVY4 71 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 H0Y3Z8 333 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 LDHCP07864 332 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 FGFR4P22455 802 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 ARID5AQ03989 594 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 TCEAL1Q15170 157 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 EDRF1Q3B7T1 1238 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 TMEM259Q4ZIN3 620 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 PHLDB3Q6NSJ2 640 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 ALDH16A1Q8IZ83 802 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 NT5C3AQ9H0P0 336 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 WHRNQ9P202 907 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 ZNF232Q9UNY5 417 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 SUGT1Q9Y2Z0 365 aa23.23■■□□□ 1.31
CLDND1-202ENST00000394180 PSMG1O95456 288 aa23.22■■□□□ 1.31
CLDND1-202ENST00000394180 CDR2Q01850 454 aa23.22■■□□□ 1.31
CLDND1-202ENST00000394180 GPIHBP1Q8IV16 184 aa23.22■■□□□ 1.31
CLDND1-202ENST00000394180 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.22■■□□□ 1.31
CLDND1-202ENST00000394180 SLCO2A1Q92959 643 aa23.22■■□□□ 1.31
CLDND1-202ENST00000394180 ZNRF3Q9ULT6 936 aa23.22■■□□□ 1.31
CLDND1-202ENST00000394180 WDR37Q9Y2I8 494 aa23.22■■□□□ 1.31
CLDND1-202ENST00000394180 ADAMTSL1Q8N6G6 1762 aa23.22■■□□□ 1.31
CLDND1-202ENST00000394180 DDX3XO00571 662 aaKnown RBP eCLIP23.21■■□□□ 1.31
CLDND1-202ENST00000394180 UCHL3P15374 230 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 YY1P25490 414 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 SCNN1BP51168 640 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 RCN1Q15293 331 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 INF2Q27J81 1249 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 CEP128Q6ZU80 1094 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 ANKRD42Q8N9B4 389 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 NRG4Q8WWG1 115 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 HPS3Q969F9 1004 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 ERVK-5Q9HDB9 667 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms