RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 RTP2Q5QGT7 225 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 SLC27A1Q6PCB7 646 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 CDR2LQ86X02 465 aaPredicted RBP17.08■□□□□ 0.32
CHMP3-202ENST00000393773 SLFN12Q8IYM2 578 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 PJA1Q8NG27 643 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 RABGGTAQ92696 567 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 RMDN1Q96DB5 314 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 PAAF1Q9BRP4 392 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 TRIM6Q9C030 488 aaPredicted RBP17.08■□□□□ 0.32
CHMP3-202ENST00000393773 PIDD1Q9HB75 910 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 SF3B1O75533 1304 aaKnown RBP eCLIP17.07■□□□□ 0.32
CHMP3-202ENST00000393773 POTEMA6NI47 508 aa17.07■□□□□ 0.32
CHMP3-202ENST00000393773 DTNBO60941 627 aa17.07■□□□□ 0.32
CHMP3-202ENST00000393773 DGAT1O75907 488 aa17.07■□□□□ 0.32
CHMP3-202ENST00000393773 CDKL5O76039 1030 aa17.07■□□□□ 0.32
CHMP3-202ENST00000393773 NPTXRO95502 500 aa17.07■□□□□ 0.32
CHMP3-202ENST00000393773 HSP90AA2PQ14568 343 aaPredicted RBP17.07■□□□□ 0.32
CHMP3-202ENST00000393773 PRSS55Q6UWB4 352 aaPredicted RBP17.07■□□□□ 0.32
CHMP3-202ENST00000393773 TPH2Q8IWU9 490 aa17.07■□□□□ 0.32
CHMP3-202ENST00000393773 HACE1Q8IYU2 909 aa17.07■□□□□ 0.32
CHMP3-202ENST00000393773 ST13P5Q8NFI4 369 aaPredicted RBP17.07■□□□□ 0.32
CHMP3-202ENST00000393773 FGF14Q92915 247 aa17.07■□□□□ 0.32
CHMP3-202ENST00000393773 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
CHMP3-202ENST00000393773 EIF2AK1Q9BQI3 630 aaKnown RBP17.07■□□□□ 0.32
CHMP3-202ENST00000393773 FOXQ1Q9C009 403 aa17.07■□□□□ 0.32
CHMP3-202ENST00000393773 PDCD11Q14690 1871 aaKnown RBP17.07■□□□□ 0.32
CHMP3-202ENST00000393773 A0A1B0GUA9 196 aa17.06■□□□□ 0.32
CHMP3-202ENST00000393773 KIF4AO95239 1232 aa17.06■□□□□ 0.32
CHMP3-202ENST00000393773 SP9P0CG40 484 aa17.06■□□□□ 0.32
CHMP3-202ENST00000393773 RARRES1P49788 294 aa17.06■□□□□ 0.32
CHMP3-202ENST00000393773 NCBP1Q09161 790 aaKnown RBP17.06■□□□□ 0.32
CHMP3-202ENST00000393773 DCLRE1AQ6PJP8 1040 aa17.06■□□□□ 0.32
CHMP3-202ENST00000393773 KCNG4Q8TDN1 519 aa17.06■□□□□ 0.32
CHMP3-202ENST00000393773 HSD17B14Q9BPX1 270 aa17.06■□□□□ 0.32
CHMP3-202ENST00000393773 RPP25Q9BUL9 199 aaKnown RBP17.06■□□□□ 0.32
CHMP3-202ENST00000393773 POLR3FQ9H1D9 316 aaPredicted RBP17.06■□□□□ 0.32
CHMP3-202ENST00000393773 ANKEF1Q9NU02 776 aa17.06■□□□□ 0.32
CHMP3-202ENST00000393773 KLK14Q9P0G3 267 aa17.06■□□□□ 0.32
CHMP3-202ENST00000393773 SIT1Q9Y3P8 196 aa17.06■□□□□ 0.32
CHMP3-202ENST00000393773 ZFP37Q9Y6Q3 630 aaPredicted RBP17.06■□□□□ 0.32
CHMP3-202ENST00000393773 PTGESO14684 152 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 LRRN2O75325 713 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 FSHRP23945 695 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 STARD6P59095 220 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 NTHL1P78549 312 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 NR5A1Q13285 461 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 TUSC3Q13454 348 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 CDCA2Q69YH5 1023 aaPredicted RBP17.05■□□□□ 0.32
CHMP3-202ENST00000393773 ZC3H14Q6PJT7 736 aaKnown RBP17.05■□□□□ 0.32
CHMP3-202ENST00000393773 PARM1Q6UWI2 310 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 GRASPQ7Z6J2 395 aaPredicted RBP17.05■□□□□ 0.32
CHMP3-202ENST00000393773 C1orf210Q8IVY1 113 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 KIAA2013Q8IYS2 634 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 MAML2Q8IZL2 1156 aaPredicted RBP17.05■□□□□ 0.32
CHMP3-202ENST00000393773 HASPINQ8TF76 798 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 CLSTN3Q9BQT9 956 aa17.05■□□□□ 0.32
CHMP3-202ENST00000393773 MED19A0JLT2 244 aaPredicted RBP17.04■□□□□ 0.32
CHMP3-202ENST00000393773 CASTOR2A6NHX0 329 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 WNT7AO00755 349 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 MARCH6O60337 910 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 CTDNEP1O95476 244 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 XBP1P17861 261 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 HOXA9P31269 272 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 NAB2Q15742 525 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 PSMD5Q16401 504 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 LNX1Q8TBB1 728 aaPredicted RBP17.04■□□□□ 0.32
CHMP3-202ENST00000393773 DDX23Q9BUQ8 820 aaKnown RBP17.04■□□□□ 0.32
CHMP3-202ENST00000393773 CXCL16Q9H2A7 254 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 PDRG1Q9NUG6 133 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 PARP2Q9UGN5 583 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 CDH7Q9ULB5 785 aa17.04■□□□□ 0.32
CHMP3-202ENST00000393773 CITO14578 2027 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 TTLL13PA6NNM8 815 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 ADAM12O43184 909 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 USO1O60763 962 aaKnown RBP17.03■□□□□ 0.32
CHMP3-202ENST00000393773 TADA2AO75478 443 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 BAG4O95429 457 aaKnown RBP17.03■□□□□ 0.32
CHMP3-202ENST00000393773 C8AP07357 584 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 HNRNPA1P09651 372 aaKnown RBP eCLIP17.03■□□□□ 0.32
CHMP3-202ENST00000393773 LIN9Q5TKA1 542 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 PRIMPOLQ96LW4 560 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 TTPALQ9BTX7 342 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 PDZD7Q9H5P4 517 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 GPRC5CQ9NQ84 441 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 PRMT7Q9NVM4 692 aaPredicted RBP17.03■□□□□ 0.32
CHMP3-202ENST00000393773 TICRRQ7Z2Z1 1910 aa17.03■□□□□ 0.32
CHMP3-202ENST00000393773 KMT2BQ9UMN6 2715 aaPredicted RBP17.03■□□□□ 0.32
CHMP3-202ENST00000393773 LRRIQ4A6NIV6 560 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 PFKFB2O60825 505 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 POU2F2P09086 479 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 KRT2P35908 639 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 GPC5P78333 572 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 MLF2Q15773 248 aaPredicted RBP17.02■□□□□ 0.32
CHMP3-202ENST00000393773 CALCRLQ16602 461 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 FAM187BQ17R55 369 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 MTSS1LQ765P7 747 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 SUMF1Q8NBK3 374 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms