RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 PRG3Q9Y2Y8 225 aaPredicted RBP13.66□□□□□ -0.22
CTSC-202ENST00000393301 DOCK6Q96HP0 2047 aa13.66□□□□□ -0.22
CTSC-202ENST00000393301 TMEM189-UBE2V1I3L0A0 370 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 ACKR2O00590 384 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 N4BP3O15049 544 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.22
CTSC-202ENST00000393301 POU2F2P09086 479 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 SP100P23497 879 aaPredicted RBP13.65□□□□□ -0.22
CTSC-202ENST00000393301 CLCN5P51795 746 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 TUSC3Q13454 348 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 NAB2Q15742 525 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 USP41Q3LFD5 358 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 HAUS3Q68CZ6 603 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 HSCBQ8IWL3 235 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 ZBTB8OSQ8IWT0 167 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 C4orf32Q8N8J7 132 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 ERMNQ8TAM6 284 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 NXPE3Q969Y0 559 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 ZNF707Q96C28 371 aaPredicted RBP13.65□□□□□ -0.22
CTSC-202ENST00000393301 GPR62Q9BZJ7 368 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 PDZD7Q9H5P4 517 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 GPRC5CQ9NQ84 441 aa13.65□□□□□ -0.22
CTSC-202ENST00000393301 MORC2Q9Y6X9 1032 aaPredicted RBP13.65□□□□□ -0.22
CTSC-202ENST00000393301 CLUHO75153 1309 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 SF3B1O75533 1304 aaKnown RBP eCLIP13.64□□□□□ -0.23
CTSC-202ENST00000393301 F8W810 466 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 N4BP1O75113 896 aaKnown RBP13.64□□□□□ -0.23
CTSC-202ENST00000393301 NPTXRO95502 500 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 ASGR2P07307 311 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 GJB2P29033 226 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 MCM7P33993 719 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 TDGQ13569 410 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 PPP2R5AQ15172 486 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 ASTLQ6HA08 431 aaPredicted RBP13.64□□□□□ -0.23
CTSC-202ENST00000393301 NOSTRINQ8IVI9 506 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 PIK3R5Q8WYR1 880 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 BSNDQ8WZ55 320 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 STAMQ92783 540 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 LIMD1Q9UGP4 676 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 STK24Q9Y6E0 443 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 CITO14578 2027 aa13.64□□□□□ -0.23
CTSC-202ENST00000393301 NOTCH4Q99466 2003 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 LRRIQ4A6NIV6 560 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 PTGESO14684 152 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 SSBP05455 408 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTSC-202ENST00000393301 ATP2B1P20020 1258 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 AKAP5P24588 427 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 HOXA9P31269 272 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 PDIA5Q14554 519 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
CTSC-202ENST00000393301 MAPK6Q16659 721 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 CWF19L1Q69YN2 538 aaKnown RBP13.63□□□□□ -0.23
CTSC-202ENST00000393301 POTEGQ6S5H5 508 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 PADI6Q6TGC4 694 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 RTL10Q7L3V2 364 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 BRAPQ7Z569 592 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 TMEM105Q8N8V8 129 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 IGSF22Q8N9C0 903 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 KCNK12Q9HB15 430 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 FBXW11Q9UKB1 542 aa13.63□□□□□ -0.23
CTSC-202ENST00000393301 PDCD11Q14690 1871 aaKnown RBP13.63□□□□□ -0.23
CTSC-202ENST00000393301 CCDC195A0A1B0GUA6 201 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 C2CD2LO14523 706 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 TGM5O43548 720 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 EDN1P05305 212 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 PRKCBP05771 671 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 NBL1P41271 181 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 EFNA5P52803 228 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 ELAVL2Q12926 359 aaKnown RBP13.62□□□□□ -0.23
CTSC-202ENST00000393301 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 XKR4Q5GH76 650 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 PDXDC1Q6P996 788 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 PIAS4Q8N2W9 510 aaPredicted RBP13.62□□□□□ -0.23
CTSC-202ENST00000393301 KIFAP3Q92845 792 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 KCNN1Q92952 543 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 PRKD2Q9BZL6 878 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 NT5C3AQ9H0P0 336 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 SMOC2Q9H3U7 446 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 ZFP37Q9Y6Q3 630 aaPredicted RBP13.62□□□□□ -0.23
CTSC-202ENST00000393301 FANCMQ8IYD8 2048 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 PHLPP2Q6ZVD8 1323 aa13.62□□□□□ -0.23
CTSC-202ENST00000393301 ARHGEF35A5YM69 484 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 ANHXE9PGG2 379 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 LAD1O00515 517 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 RFPL2O75678 378 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 ZMYND10O75800 440 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 RECQL4O94761 1208 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 THP07101 528 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 NPR3P17342 541 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 AOC1P19801 751 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 PRPHP41219 470 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 PRPF4BQ13523 1007 aaKnown RBP13.61□□□□□ -0.23
CTSC-202ENST00000393301 BECN1Q14457 450 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 ECM1Q16610 540 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 RILPL1Q5EBL4 403 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 RTP2Q5QGT7 225 aa13.61□□□□□ -0.23
CTSC-202ENST00000393301 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms