RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 GPC3P51654 580 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 SLC8A3P57103 927 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 DLG4P78352 724 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 FMO1Q01740 532 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 CENPCQ03188 943 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 PTP4A2Q12974 167 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 RRP1BQ14684 758 aaKnown RBP10.7□□□□□ -0.7
COL17A1-203ENST00000393211 ACAD10Q6JQN1 1059 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 AADACL2Q6P093 401 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 ENOSF1Q7L5Y1 443 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 USP37Q86T82 979 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 NOP9Q86U38 636 aaKnown RBP10.7□□□□□ -0.7
COL17A1-203ENST00000393211 FAM160B2Q86V87 743 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 CEP57Q86XR8 500 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 RIBC1Q8N443 379 aaPredicted RBP10.7□□□□□ -0.7
COL17A1-203ENST00000393211 C7orf43Q8WVR3 580 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 DYDC1Q8WWB3 177 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 CKAP2Q8WWK9 683 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 ARHGEF2Q92974 986 aaKnown RBP10.7□□□□□ -0.7
COL17A1-203ENST00000393211 TRIM11Q96F44 468 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 C8orf37Q96NL8 207 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 MXRA8Q9BRK3 442 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 CDC42EP4Q9H3Q1 356 aaKnown RBP10.7□□□□□ -0.7
COL17A1-203ENST00000393211 EBF2Q9HAK2 575 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 AVENQ9NQS1 362 aaPredicted RBP10.7□□□□□ -0.7
COL17A1-203ENST00000393211 DONSONQ9NYP3 566 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 HSPBP1Q9NZL4 362 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 WRAP73Q9P2S5 460 aaPredicted RBP10.7□□□□□ -0.7
COL17A1-203ENST00000393211 ARL2BPQ9Y2Y0 163 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 TMX2Q9Y320 296 aa10.7□□□□□ -0.7
COL17A1-203ENST00000393211 SMIM23A6NLE4 172 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 FAM196BA6NMK8 535 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 ATP2C2O75185 946 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 GDF11O95390 407 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 GH2P01242 217 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 NQO1P15559 274 aaKnown RBP10.69□□□□□ -0.7
COL17A1-203ENST00000393211 GCLMP48507 274 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 CCDC15Q0P6D6 951 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 BNIP1Q12981 228 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 ACVR2BQ13705 512 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 CRYMQ14894 314 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 SHROOM1Q2M3G4 852 aaPredicted RBP10.69□□□□□ -0.7
COL17A1-203ENST00000393211 SGO2Q562F6 1265 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 KRT39Q6A163 491 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 TLDC1Q6P9B6 456 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 MIER3Q7Z3K6 550 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 LARGE2Q8N3Y3 721 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 RDH13Q8NBN7 331 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 TMC2Q8TDI7 906 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 ZNF653Q96CK0 615 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 CCDC77Q9BR77 488 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 TRAIPQ9BWF2 469 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 TMEM117Q9H0C3 514 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL17A1-203ENST00000393211 ZNF646O15015 1829 aaPredicted RBP10.69□□□□□ -0.7
COL17A1-203ENST00000393211 SLX4Q8IY92 1834 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 A0A1W2PRG0 241 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 TMEM120BA0PK00 339 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 ZC3H11AO75152 810 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL17A1-203ENST00000393211 SLURP2P0DP57 97 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 ARP10275 920 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 CYP11B1P15538 503 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 CCND1P24385 295 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 PDE6BP35913 854 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 NCKAP1LP55160 1127 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 COPS2P61201 443 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 KRT17Q04695 432 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 NR1H3Q13133 447 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 STAT4Q14765 748 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 DACT2Q5SW24 774 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 RNF43Q68DV7 783 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 VSTM1Q6UX27 236 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 PPP1R21Q6ZMI0 780 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 ARHGEF18Q6ZSZ5 1173 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 HAUS6Q7Z4H7 955 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 ZNF677Q86XU0 584 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 SAMD3Q8N6K7 520 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 BANK1Q8NDB2 785 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 ATL2Q8NHH9 583 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 DHX38Q92620 1227 aaKnown RBP10.69□□□□□ -0.7
COL17A1-203ENST00000393211 RSRC1Q96IZ7 334 aaKnown RBP10.69□□□□□ -0.7
COL17A1-203ENST00000393211 KREMEN1Q96MU8 473 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 RXFP1Q9HBX9 757 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 TMEM8AQ9HCN3 771 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 BATF3Q9NR55 127 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 AAASQ9NRG9 546 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 PRKAG3Q9UGI9 489 aa10.69□□□□□ -0.7
COL17A1-203ENST00000393211 ADGRA3Q8IWK6 1321 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 RGPD3A6NKT7 1758 aaPredicted RBP10.68□□□□□ -0.7
COL17A1-203ENST00000393211 RGPD4Q7Z3J3 1758 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 TCRBV7S2A1N4TA0A589 114 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 ANKRD63C9JTQ0 380 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 TP73O15350 636 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 CYP26A1O43174 497 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 CDH16O75309 829 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 ABHD2P08910 425 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 IVDP26440 423 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 SLCO1A2P46721 670 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 HSD17B4P51659 736 aa10.68□□□□□ -0.7
COL17A1-203ENST00000393211 RBM5P52756 815 aaKnown RBP eCLIP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms