RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 KCNMB3Q9NPA1 279 aa17.61■□□□□ 0.41
SNX9-201ENST00000392185 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
SNX9-201ENST00000392185 HOXD10P28358 340 aa17.61■□□□□ 0.41
SNX9-201ENST00000392185 GABPB1Q06547 395 aaPredicted RBP17.61■□□□□ 0.41
SNX9-201ENST00000392185 MED4Q9NPJ6 270 aa17.61■□□□□ 0.41
SNX9-201ENST00000392185 AMACRQ9UHK6 382 aa17.61■□□□□ 0.41
SNX9-201ENST00000392185 ZNF541Q9H0D2 1346 aa17.61■□□□□ 0.41
SNX9-201ENST00000392185 RNF40O75150 1001 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 TADA3O75528 432 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 ACSL3O95573 720 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 TMEM132DQ14C87 1099 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 LGSNQ5TDP6 509 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 METTL7BQ6UX53 244 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 MMS22LQ6ZRQ5 1243 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 TRIM59Q8IWR1 403 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 MMTAG2Q9BU76 263 aaKnown RBP17.6■□□□□ 0.41
SNX9-201ENST00000392185 PRMT7Q9NVM4 692 aaPredicted RBP17.6■□□□□ 0.41
SNX9-201ENST00000392185 FAM237AA0A1B0GTK4 181 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 ADAMTS3O15072 1205 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 EXTL3O43909 919 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 ALDH5A1P51649 535 aaPredicted RBP17.6■□□□□ 0.41
SNX9-201ENST00000392185 MRPS9P82933 396 aaKnown RBP17.6■□□□□ 0.41
SNX9-201ENST00000392185 VSIG10LQ86VR7 867 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 TAS1R2Q8TE23 839 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 C1orf54Q8WWF1 131 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 NOC2LQ9Y3T9 749 aaKnown RBP17.6■□□□□ 0.41
SNX9-201ENST00000392185 SYNGAP1Q96PV0 1343 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 GCLCP48506 637 aaPredicted RBP17.6■□□□□ 0.41
SNX9-201ENST00000392185 TMEM132BQ14DG7 1078 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 FAM71BQ8TC56 605 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 C17orf75Q9HAS0 396 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 OLFML3Q9NRN5 406 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 FAM49BQ9NUQ9 324 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 KLK14Q9P0G3 267 aa17.6■□□□□ 0.41
SNX9-201ENST00000392185 KIAA0391O15091 583 aaKnown RBP17.59■□□□□ 0.41
SNX9-201ENST00000392185 TBC1D12O60347 775 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 RTN2O75298 545 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 EGFRP00533 1210 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 ZNF286BP0CG31 522 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 SNHG28P0DPA3 235 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 GUCY2CP25092 1073 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 NAB2Q15742 525 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 CATSPERGQ6ZRH7 1159 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 BCAS4Q8TDM0 211 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 RNF139Q8WU17 664 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 GTF3C2Q8WUA4 911 aaPredicted RBP17.59■□□□□ 0.41
SNX9-201ENST00000392185 RNPC3Q96LT9 517 aaKnown RBP17.59■□□□□ 0.41
SNX9-201ENST00000392185 ASAP2O43150 1006 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 SDC4P31431 198 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 PPATQ06203 517 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 GEN1Q17RS7 908 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 CFAP157Q5JU67 520 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 C10orf67Q8IYJ2 551 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 BBOF1Q8ND07 529 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 CCDC110Q8TBZ0 833 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 EHD2Q9NZN4 543 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 KLRG1Q96E93 195 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 HOMER3Q9NSC5 361 aa17.59■□□□□ 0.41
SNX9-201ENST00000392185 H3BRB1 525 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 LPXNO60711 386 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 GRAP2O75791 330 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 ZBED1O96006 694 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 ORC1Q13415 861 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 SETDB1Q15047 1291 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 CC2D1AQ6P1N0 951 aaPredicted RBP17.58■□□□□ 0.41
SNX9-201ENST00000392185 TEX2Q8IWB9 1127 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 SYT17Q9BSW7 474 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 LRRC1Q9BTT6 524 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 TUT1Q9H6E5 874 aaKnown RBP17.58■□□□□ 0.41
SNX9-201ENST00000392185 IFT122Q9HBG6 1241 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.58■□□□□ 0.41
SNX9-201ENST00000392185 NAGPAQ9UK23 515 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 RIPK3Q9Y572 518 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 NDC80O14777 642 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 KLRC4O43908 158 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 PSMD10O75832 226 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 VSNL1P62760 191 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 SGSM1Q2NKQ1 1148 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 BTNL9Q6UXG8 535 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 CCDC60Q8IWA6 550 aaPredicted RBP17.58■□□□□ 0.41
SNX9-201ENST00000392185 DNERQ8NFT8 737 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 P3H4Q92791 437 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 COPS5Q92905 334 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 RUNDC3BQ96NL0 473 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 ZCCHC17Q9NP64 241 aaKnown RBP17.58■□□□□ 0.41
SNX9-201ENST00000392185 CYP39A1Q9NYL5 469 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 ARHGAP20Q9P2F6 1191 aa17.58■□□□□ 0.41
SNX9-201ENST00000392185 NFKBIEO00221 500 aa17.58■□□□□ 0.4
SNX9-201ENST00000392185 CYP3A4P08684 503 aa17.58■□□□□ 0.4
SNX9-201ENST00000392185 INSRRP14616 1297 aa17.58■□□□□ 0.4
SNX9-201ENST00000392185 ADORA2AP29274 412 aa17.58■□□□□ 0.4
SNX9-201ENST00000392185 PHBP35232 272 aa17.58■□□□□ 0.4
SNX9-201ENST00000392185 SLC12A3P55017 1021 aa17.58■□□□□ 0.4
SNX9-201ENST00000392185 RBP5P82980 135 aa17.58■□□□□ 0.4
SNX9-201ENST00000392185 HP1BP3Q5SSJ5 553 aaPredicted RBP17.58■□□□□ 0.4
SNX9-201ENST00000392185 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.58■□□□□ 0.47e-13■■■□□ 18
SNX9-201ENST00000392185 PACSIN1Q9BY11 444 aa17.58■□□□□ 0.4
SNX9-201ENST00000392185 MTMR12Q9C0I1 747 aa17.58■□□□□ 0.4
SNX9-201ENST00000392185 A0A1W2PQJ5 194 aa17.58■□□□□ 0.4
SNX9-201ENST00000392185 AP3M2P53677 418 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms