RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 MYO1EQ12965 1108 aa13.73□□□□□ -0.21
ERCC2-204ENST00000391945 NAB2Q15742 525 aa13.73□□□□□ -0.21
ERCC2-204ENST00000391945 SV2AQ7L0J3 742 aa13.73□□□□□ -0.21
ERCC2-204ENST00000391945 ZNF571Q7Z3V5 609 aaPredicted RBP13.73□□□□□ -0.21
ERCC2-204ENST00000391945 SLC35G2Q8TBE7 412 aa13.73□□□□□ -0.21
ERCC2-204ENST00000391945 KIF12Q96FN5 646 aa13.73□□□□□ -0.21
ERCC2-204ENST00000391945 PBKQ96KB5 322 aa13.73□□□□□ -0.21
ERCC2-204ENST00000391945 INPP4AQ96PE3 977 aaPredicted RBP13.73□□□□□ -0.21
ERCC2-204ENST00000391945 PAIP2Q9BPZ3 127 aaKnown RBP13.73□□□□□ -0.21
ERCC2-204ENST00000391945 HEMGNQ9BXL5 484 aa13.73□□□□□ -0.21
ERCC2-204ENST00000391945 ZNF148Q9UQR1 794 aa13.73□□□□□ -0.21
ERCC2-204ENST00000391945 TGFB1I1O43294 461 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 TGFB3P10600 412 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 ZSCAN20P17040 1043 aaPredicted RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 TNFAIP2Q03169 654 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 TRIP13Q15645 432 aaPredicted RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 OR6B2Q6IFH4 312 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 PLEKHH3Q7Z736 793 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 SPATA4Q8NEY3 305 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 FAM71BQ8TC56 605 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 COG1Q8WTW3 980 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 DHX38Q92620 1227 aaKnown RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 GCOM2Q9BZD3 368 aaPredicted RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 MRPL47Q9HD33 250 aaKnown RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 COL4A1P02462 1669 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 TNRC6CQ9HCJ0 1690 aaKnown RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 GLTPD2A6NH11 291 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 ADCY8P40145 1251 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 ADCYAP1R1P41586 468 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 KCNMA1Q12791 1236 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 NFU1Q9UMS0 254 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 DDX60Q8IY21 1712 aaKnown RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 INSRRP14616 1297 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 RFX1P22670 979 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 NAMPTP43490 491 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 GCLCP48506 637 aaPredicted RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 NOVP48745 357 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 PLTPP55058 493 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 NOP14P78316 857 aaKnown RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 SPOPLQ6IQ16 392 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 WDR59Q6PJI9 974 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 PNKPQ96T60 521 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 WRAP73Q9P2S5 460 aaPredicted RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 PIN4Q9Y237 131 aaKnown RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 ZNF536O15090 1300 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 H2AFXP16104 143 aaPredicted RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 HADHQ16836 314 aaKnown RBP13.72□□□□□ -0.21
ERCC2-204ENST00000391945 CDO1Q16878 200 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 KIZQ2M2Z5 673 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 KRT71Q3SY84 523 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 SGO2Q562F6 1265 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 TMEM35BQ8NCS4 154 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 TRIM11Q96F44 468 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 MED4Q9NPJ6 270 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 RNF14Q9UBS8 474 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 DAAM1Q9Y4D1 1078 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 IKBKGQ9Y6K9 419 aa13.72□□□□□ -0.21
ERCC2-204ENST00000391945 LRP5O75197 1615 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 LRRD1A4D1F6 860 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 DAPK3O43293 454 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 CTNNA1P35221 906 aaKnown RBP13.71□□□□□ -0.21
ERCC2-204ENST00000391945 GNASQ5JWF2 1037 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 CAPN12Q6ZSI9 719 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 FERMT1Q9BQL6 677 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 CCDC77Q9BR77 488 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 SNX25Q9H3E2 840 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 AGAP1Q9UPQ3 857 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 INPP5FQ9Y2H2 1132 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 H3BRB1 525 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 PIK3R2O00459 728 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 XPOTO43592 962 aaKnown RBP13.71□□□□□ -0.21
ERCC2-204ENST00000391945 CYP2C9P11712 490 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 RIN2Q8WYP3 895 aaPredicted RBP13.71□□□□□ -0.21
ERCC2-204ENST00000391945 TMEM117Q9H0C3 514 aa13.71□□□□□ -0.21
ERCC2-204ENST00000391945 TUT1Q9H6E5 874 aaKnown RBP13.71□□□□□ -0.21
ERCC2-204ENST00000391945 SPDYE5A6NIY4 337 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 ANKRD65E5RJM6 399 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 MAGEB2O15479 319 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 SGPL1O95470 568 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 TBXAS1P24557 533 aaPredicted RBP13.71□□□□□ -0.22
ERCC2-204ENST00000391945 GNGT1P63211 74 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 SPIRE1Q08AE8 756 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 MICALL1Q8N3F8 863 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 GTF3C2Q8WUA4 911 aaPredicted RBP13.71□□□□□ -0.22
ERCC2-204ENST00000391945 KAT5Q92993 513 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 HAUS1Q96CS2 278 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 HVCN1Q96D96 273 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 LRRC1Q9BTT6 524 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 PDGFCQ9NRA1 345 aa13.71□□□□□ -0.22
ERCC2-204ENST00000391945 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.71□□□□□ -0.22
ERCC2-204ENST00000391945 MYH6P13533 1939 aa13.7□□□□□ -0.22
ERCC2-204ENST00000391945 A0A087WZ62 844 aa13.7□□□□□ -0.22
ERCC2-204ENST00000391945 GOLGA6L7A0A1B0GV03 622 aa13.7□□□□□ -0.22
ERCC2-204ENST00000391945 CAPN9O14815 690 aa13.7□□□□□ -0.22
ERCC2-204ENST00000391945 PBX1P40424 430 aa13.7□□□□□ -0.22
ERCC2-204ENST00000391945 SNX16P57768 344 aa13.7□□□□□ -0.22
ERCC2-204ENST00000391945 PPP3CAQ08209 521 aa13.7□□□□□ -0.22
ERCC2-204ENST00000391945 DGKDQ16760 1214 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms