RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 SIP14410 1827 aa10.54□□□□□ -0.72
TRBV20-1-201ENST00000390394 LTBP2Q14767 1821 aa10.54□□□□□ -0.72
TRBV20-1-201ENST00000390394 ANKRD63C9JTQ0 380 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 SOX1O00570 391 aaPredicted RBP10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 SLC16A3O15427 465 aaKnown RBP10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 MGEA5O60502 916 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 NR3C1P04150 777 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 EPB41P11171 864 aaKnown RBP10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 KRT13P13646 458 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 ATP2A2P16615 1042 aaKnown RBP10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 HOXD13P35453 343 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 PSMC2P35998 433 aaKnown RBP10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 TPM4P67936 248 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 PPP2R3AQ06190 1150 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 ENPEPQ07075 957 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 UBXN11Q5T124 520 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 EEF1DP3Q658K8 133 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 C16orf59Q7L2K0 433 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 RTN4RL1Q86UN2 441 aaPredicted RBP10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 THNSL1Q8IYQ7 743 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 RNF169Q8NCN4 708 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 EIF2AQ9BY44 585 aaKnown RBP10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 OSBPL7Q9BZF2 842 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 TMEM117Q9H0C3 514 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 ASB7Q9H672 318 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 METTL14Q9HCE5 456 aaKnown RBP10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 SLC38A7Q9NVC3 462 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 CTNND2Q9UQB3 1225 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 INSL6Q9Y581 213 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 SCN5AQ14524 2016 aa10.53□□□□□ -0.72
TRBV20-1-201ENST00000390394 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 TTLL13PA6NNM8 815 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 BECN2A8MW95 431 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 ABLIM1O14639 778 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 CLIC2O15247 247 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 STX10O60499 249 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 EDN1P05305 212 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 BMP6P22004 513 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 ADSSP30520 456 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 CYP2J2P51589 502 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 AP3M2P53677 418 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 SNRNP35Q16560 246 aaKnown RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 DPCR1Q3MIW9 517 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 ZCWPW2Q504Y3 356 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 RASIP1Q5U651 963 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 SLC39A4Q6P5W5 647 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 INTS8Q75QN2 995 aaKnown RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 FILIP1Q7Z7B0 1213 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 ZNF598Q86UK7 904 aaKnown RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 CDR2LQ86X02 465 aaPredicted RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 TDHQ8IZJ6 230 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 CSGALNACT2Q8N6G5 542 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 SMG8Q8ND04 991 aaKnown RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 ANKRD20A12PQ8NF67 263 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 CACTINQ8WUQ7 758 aaKnown RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 LINC01599Q8WXQ3 324 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 LRCH3Q96II8 777 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 ZBTB45Q96K62 511 aaPredicted RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 FBXL18Q96ME1 805 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 FAM193BQ96PV7 902 aaPredicted RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 FNBP1Q96RU3 617 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 YME1L1Q96TA2 773 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 RAD9AQ99638 391 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 BPIFA3Q9BQP9 254 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 CBWD1Q9BRT8 395 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 FAM213AQ9BRX8 229 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 SEMA6BQ9H3T3 888 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 NXF3Q9H4D5 531 aaKnown RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 PCIF1Q9H4Z3 704 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 SNTG2Q9NY99 539 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 RBAKQ9NYW8 714 aaPredicted RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 MAGEC2Q9UBF1 373 aaPredicted RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 CPSF3Q9UKF6 684 aaKnown RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 STXBP5LQ9Y2K9 1186 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 DERAQ9Y315 318 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 R3HCC1Q9Y3T6 440 aaKnown RBP10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 RWDD3Q9Y3V2 267 aa10.52□□□□□ -0.73
TRBV20-1-201ENST00000390394 TTC28Q96AY4 2481 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 INPPL1O15357 1258 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 RECQL4O94761 1208 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 UPP2O95045 317 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 GJB5O95377 273 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 THP07101 528 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 TPM2P07951 284 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 CD44P16070 742 aaKnown RBP10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 IBSPP21815 317 aaPredicted RBP10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 ZNF165P49910 485 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 EPHB4P54760 987 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 OSTNP61366 133 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 RNASELQ05823 741 aaKnown RBP10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 RAB30Q15771 203 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 NOMO2Q5JPE7 1267 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 CEP135Q66GS9 1140 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 ANKRD40Q6AI12 368 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 TTI2Q6NXR4 508 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 LRSAM1Q6UWE0 723 aa10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRBV20-1-201ENST00000390394 HERC6Q8IVU3 1022 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms