RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 GYG2O15488 501 aa17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 NPEPPSP55786 919 aa17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 LONRF1Q17RB8 773 aa17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 CPA5Q8WXQ8 436 aa17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 MRPL4Q9BYD3 311 aaKnown RBP17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 DLG5Q8TDM6 1919 aa17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 SREBF1P36956 1147 aa17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 BZW1Q7L1Q6 419 aaKnown RBP17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 ZNF571Q7Z3V5 609 aaPredicted RBP17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 WRNIP1Q96S55 665 aa17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 CYTH3O43739 400 aa17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 SH3BGRP55822 239 aaPredicted RBP17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 JPH1Q9HDC5 661 aaPredicted RBP17.13■□□□□ 0.33
PTPRN2-201ENST00000389413 GLI1P08151 1106 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 OSBPP22059 807 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 SLC29A2Q14542 456 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 DUOXA2Q1HG44 320 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 LPAR1Q92633 364 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 ACAD9Q9H845 621 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 LRRC4Q9HBW1 653 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 TMEM8AQ9HCN3 771 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 CYP26B1Q9NR63 512 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 FGFR1OP2Q9NVK5 253 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 WDR46O15213 610 aaKnown RBP17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 MAP3K7O43318 606 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 SPAG7O75391 227 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 KCNJ1P48048 391 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 RCOR2Q8IZ40 523 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 RBM15Q96T37 977 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 PPP1R16BQ96T49 567 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 AIPL1Q9NZN9 384 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 PCDHB2Q9Y5E7 798 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 ATRNO75882 1429 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 FOXN3O00409 490 aaPredicted RBP17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 SMIM24O75264 130 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 AKAP3O75969 853 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 MAPK7Q13164 816 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 DALRD3Q5D0E6 543 aaKnown RBP17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 CCDC117Q8IWD4 279 aaPredicted RBP17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 RNF169Q8NCN4 708 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 C2orf40Q9H1Z8 148 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 BLOC1S4Q9NUP1 217 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 PPARGC1AQ9UBK2 798 aaKnown RBP17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 DCTN4Q9UJW0 460 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 ANGPTL2Q9UKU9 493 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 USP15Q9Y4E8 981 aaPredicted RBP17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 SMIM22K7EJ46 135 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 GPC4O75487 556 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 ZNF772Q68DY9 489 aaPredicted RBP17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 DPP9Q86TI2 863 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 MIPOL1Q8TD10 442 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 PABPC3Q9H361 631 aaKnown RBP17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 SCOCQ9UIL1 159 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 HEY1Q9Y5J3 304 aa17.12■□□□□ 0.33
PTPRN2-201ENST00000389413 ATMINO43313 823 aaPredicted RBP17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 HAUS5O94927 633 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 WDR75Q8IWA0 830 aaKnown RBP17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 FAM151AQ8WW52 585 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 TLR10Q9BXR5 811 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 TMEM117Q9H0C3 514 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 RPAP3Q9H6T3 665 aaPredicted RBP17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 TLK1Q9UKI8 766 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 A0A0A6YYK5 440 aaPredicted RBP17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 H0Y3Z8 333 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 SRGAP2BP0DMP2 458 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 COPB2P35606 906 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 GRM1Q13255 1194 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 DBN1Q16643 649 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 XKR3Q5GH77 459 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 ZNF507Q8TCN5 953 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 C9orf72Q96LT7 481 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 SMYD2Q9NRG4 433 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 KCNH7Q9NS40 1196 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 GTF3C4Q9UKN8 822 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 A0A0U1RQJ8 604 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 SSTR3P32745 418 aaPredicted RBP17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 COILP38432 576 aaPredicted RBP17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 TNFAIP2Q03169 654 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 NFIAQ12857 509 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 MAP7Q14244 749 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 HIF1AQ16665 826 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 MYCBPAPQ8TBZ2 947 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 SLC4A9Q96Q91 983 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 ZSWIM1Q9BR11 485 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 TRABDQ9H4I3 376 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 PRDM4Q9UKN5 801 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 PI4K2BG5E9Z4 385 aa17.11■□□□□ 0.33
PTPRN2-201ENST00000389413 GOLGA8QA0A0J9YX86 632 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 GOLGA8OA6NCC3 632 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 GOLGA8NF8WBI6 632 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 IL1R1P14778 569 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 ACOT2P49753 483 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 Q4G0T1 1027 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 TMEM119Q4V9L6 283 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 SLC13A5Q86YT5 568 aaPredicted RBP17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 PPM1NQ8N819 430 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms