RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
SMAD9-202ENST00000379826 MYO3BQ8WXR4 1341 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 CPP00450 1065 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 RFX6Q8HWS3 928 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 LNX1Q8TBB1 728 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-202ENST00000379826 RBM46Q8TBY0 533 aaKnown RBP12.13□□□□□ -0.47
SMAD9-202ENST00000379826 FAM213AQ9BRX8 229 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 TRIM6Q9C030 488 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-202ENST00000379826 ZFP69BQ9UJL9 534 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 ARL2BPQ9Y2Y0 163 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 ZBED8Q8IZ13 594 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 IQCKQ8N0W5 287 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 PRCCQ92733 491 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-202ENST00000379826 STAMBPL1Q96FJ0 436 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 L3MBTL1Q9Y468 752 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 LRRD1A4D1F6 860 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 PI4K2BG5E9Z4 385 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 UBOX5O94941 541 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 PRR5LQ6MZQ0 368 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 FUKQ8N0W3 1084 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 CEP170P1Q96L14 293 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 INPP4AQ96PE3 977 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-202ENST00000379826 GINM1Q9NU53 330 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 POLLQ9UGP5 575 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 COL1A1P02452 1464 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-202ENST00000379826 LRRIQ4A6NIV6 560 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 P3H1Q32P28 736 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 ZNF394Q53GI3 561 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 CFAP36Q96G28 342 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 PI4K2AQ9BTU6 479 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 TMEM117Q9H0C3 514 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 AGPAT3Q9NRZ7 376 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 TRPC6Q9Y210 931 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 GOLGA8RI6L899 631 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 PTENP60484 403 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 SCARA5Q6ZMJ2 495 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 MREGQ8N565 214 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 DEPTORQ8TB45 409 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 LRRC37BQ96QE4 947 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 CTNNAL1Q9UBT7 734 aa12.13□□□□□ -0.47
SMAD9-202ENST00000379826 DISP2A7MBM2 1401 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 ARHGAP42A6NI28 874 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 ANP32DO95626 131 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 NQO1P15559 274 aaKnown RBP12.12□□□□□ -0.47
SMAD9-202ENST00000379826 BASP1P80723 227 aaKnown RBP12.12□□□□□ -0.47
SMAD9-202ENST00000379826 SPARCL1Q14515 664 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 GBP7Q8N8V2 638 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-202ENST00000379826 ZFYVE28Q9HCC9 887 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 FAM86B1E9PN63 330 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 IPO5O00410 1097 aaKnown RBP12.12□□□□□ -0.47
SMAD9-202ENST00000379826 NOP56O00567 594 aaKnown RBP12.12□□□□□ -0.47
SMAD9-202ENST00000379826 TXNDC9O14530 226 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 GGPS1O95749 300 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 FAM86B2P0C5J1 330 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 COPS2P61201 443 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 CBWD6Q4V339 395 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 CBWD3Q5JTY5 395 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 CBWD5Q5RIA9 395 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 LONP2Q86WA8 852 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 ARHGEF19Q8IW93 802 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 MAML1Q92585 1016 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 AP5M1Q9H0R1 490 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 NR2E3Q9Y5X4 410 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 TARSP26639 723 aaKnown RBP12.12□□□□□ -0.47
SMAD9-202ENST00000379826 GPS1Q13098 491 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 CFAP61Q8NHU2 1237 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 OSBPL1AQ9BXW6 950 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 TUFT1Q9NNX1 390 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 RBAK-RBAKDNI3L0D1 243 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 NDUFB10O96000 172 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 ELF3P78545 371 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-202ENST00000379826 ITIH4Q14624 930 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 TMEM270Q6UE05 265 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 COL23A1Q86Y22 540 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-202ENST00000379826 C3orf20Q8ND61 904 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 SLC17A8Q8NDX2 589 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 UNC45AQ9H3U1 944 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 SPATS2LQ9NUQ6 558 aaKnown RBP12.12□□□□□ -0.47
SMAD9-202ENST00000379826 ABCF3Q9NUQ8 709 aa12.12□□□□□ -0.47
SMAD9-202ENST00000379826 RIPK2O43353 540 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 SLC35G1Q2M3R5 365 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 BBS9Q3SYG4 887 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 IRF2BP2Q7Z5L9 587 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 SLC47A2Q86VL8 602 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 CCDC110Q8TBZ0 833 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 SLC35C1Q96A29 364 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 ERP27Q96DN0 273 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 KIFC3Q9BVG8 833 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 CARD9Q9H257 536 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 KCTD10Q9H3F6 313 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 CDC42EP4Q9H3Q1 356 aaKnown RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 A0A0A6YYK5 440 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 KIF1CO43896 1103 aaKnown RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 KITP10721 976 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 ANXA13P27216 316 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 NFIAQ12857 509 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 SCYL2Q6P3W7 929 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 SLC13A5Q86YT5 568 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms