RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 SMTNP53814 917 aa27.11■■□□□ 1.93
TNFRSF4-201ENST00000379236 NT5DC1Q5TFE4 455 aa27.11■■□□□ 1.93
TNFRSF4-201ENST00000379236 FUT10Q6P4F1 479 aa27.11■■□□□ 1.93
TNFRSF4-201ENST00000379236 SYT2Q8N9I0 419 aaPredicted RBP27.11■■□□□ 1.93
TNFRSF4-201ENST00000379236 SLC22A17Q8WUG5 538 aa27.11■■□□□ 1.93
TNFRSF4-201ENST00000379236 TMEM134Q9H6X4 195 aa27.11■■□□□ 1.93
TNFRSF4-201ENST00000379236 TSHZ2Q9NRE2 1034 aa27.11■■□□□ 1.93
TNFRSF4-201ENST00000379236 ADAM28Q9UKQ2 775 aa27.11■■□□□ 1.93
TNFRSF4-201ENST00000379236 NR2E1Q9Y466 385 aa27.11■■□□□ 1.93
TNFRSF4-201ENST00000379236 MTCL1Q9Y4B5 1905 aaKnown RBP27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 CASTOR2A6NHX0 329 aa27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 YARSP54577 528 aaKnown RBP27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 STRN3Q13033 797 aa27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 HSP90AA2PQ14568 343 aaPredicted RBP27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 SF3A1Q15459 793 aaKnown RBP27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 ZNF568Q3ZCX4 644 aa27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 DAW1Q8N136 415 aa27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 FBXL18Q96ME1 805 aa27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 SFXN1Q9H9B4 322 aa27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 KCND2Q9NZV8 630 aa27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 TNFSF13BQ9Y275 285 aa27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 HCN4Q9Y3Q4 1203 aa27.1■■□□□ 1.93
TNFRSF4-201ENST00000379236 SFI1A8K8P3 1242 aa27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 SP100P23497 879 aaPredicted RBP27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 CLCN4P51793 760 aa27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 USP41Q3LFD5 358 aa27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 HERC4Q5GLZ8 1057 aaPredicted RBP27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 ATAT1Q5SQI0 421 aa27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 TAS1R1Q7RTX1 841 aa27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 C12orf76Q8N812 135 aaPredicted RBP27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 RABGGTAQ92696 567 aa27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 TCHPQ9BT92 498 aa27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 CCDC94Q9BW85 323 aaPredicted RBP27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 ARHGAP28Q9P2N2 729 aa27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 DPP7Q9UHL4 492 aa27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 SF3B1O75533 1304 aaKnown RBP eCLIP27.09■■□□□ 1.93
TNFRSF4-201ENST00000379236 C2orf16Q68DN1 1984 aa27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 PRR33A8MZF0 331 aa27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 F8W810 466 aa27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 SLC16A4O15374 487 aa27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 LONP1P36776 959 aaKnown RBP27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 DSG1Q02413 1049 aa27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 MAPK7Q13164 816 aa27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 TMEM119Q4V9L6 283 aa27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 ACO2Q99798 780 aaKnown RBP27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 C11orf16Q9NQ32 467 aa27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 TOPORSQ9NS56 1045 aaPredicted RBP27.08■■□□□ 1.93
TNFRSF4-201ENST00000379236 PTGESO14684 152 aa27.07■■□□□ 1.92
TNFRSF4-201ENST00000379236 PLS3P13797 630 aa27.07■■□□□ 1.92
TNFRSF4-201ENST00000379236 SLC12A3P55017 1021 aa27.07■■□□□ 1.92
TNFRSF4-201ENST00000379236 CREMQ03060 361 aa27.07■■□□□ 1.92
TNFRSF4-201ENST00000379236 ZBTB33Q86T24 672 aa27.07■■□□□ 1.92
TNFRSF4-201ENST00000379236 RNF168Q8IYW5 571 aaPredicted RBP27.07■■□□□ 1.92
TNFRSF4-201ENST00000379236 HASPINQ8TF76 798 aa27.07■■□□□ 1.92
TNFRSF4-201ENST00000379236 POMKQ9H5K3 350 aa27.07■■□□□ 1.92
TNFRSF4-201ENST00000379236 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.07■■□□□ 1.92
TNFRSF4-201ENST00000379236 MYH15Q9Y2K3 1946 aa27.07■■□□□ 1.92
TNFRSF4-201ENST00000379236 DENND4AQ7Z401 1863 aa27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 LILRB3O75022 631 aa27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 GLUD1P00367 558 aa27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 KRT18P05783 430 aaKnown RBP27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 WEE2P0C1S8 567 aa27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 DHX8Q14562 1220 aaKnown RBP27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 KIAA0319Q5VV43 1072 aa27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 TMC5Q6UXY8 1006 aa27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 INTS4Q96HW7 963 aaKnown RBP27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 TARS2Q9BW92 718 aaKnown RBP27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 GPR62Q9BZJ7 368 aa27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 FOXD4L1Q9NU39 408 aa27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 LARSQ9P2J5 1176 aaKnown RBP27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 CACNG4Q9UBN1 327 aa27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 CDH22Q9UJ99 828 aa27.06■■□□□ 1.92
TNFRSF4-201ENST00000379236 PDCD11Q14690 1871 aaKnown RBP27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 H0YCG3 227 aa27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 K7ELQ4 463 aaPredicted RBP27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 TEX28O15482 410 aa27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 HARSP12081 509 aaKnown RBP27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 OSTNP61366 133 aa27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 GLRA4Q5JXX5 417 aa27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 GPBP1Q86WP2 473 aa27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 SPIRE2Q8WWL2 714 aa27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 RIN2Q8WYP3 895 aaPredicted RBP27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 B3GALT6Q96L58 329 aa27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 CDT1Q9H211 546 aa27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 MAN1C1Q9NR34 630 aa27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 RAPGEFL1Q9UHV5 662 aa27.05■■□□□ 1.92
TNFRSF4-201ENST00000379236 SYT1P21579 422 aa27.04■■□□□ 1.92
TNFRSF4-201ENST00000379236 GRM5P41594 1212 aa27.04■■□□□ 1.92
TNFRSF4-201ENST00000379236 MATR3P43243 847 aaKnown RBP eCLIP27.04■■□□□ 1.92
TNFRSF4-201ENST00000379236 CACNB1Q02641 598 aaPredicted RBP27.04■■□□□ 1.92
TNFRSF4-201ENST00000379236 ELAVL2Q12926 359 aaKnown RBP27.04■■□□□ 1.92
TNFRSF4-201ENST00000379236 KANK3Q6NY19 840 aa27.04■■□□□ 1.92
TNFRSF4-201ENST00000379236 PAAF1Q9BRP4 392 aa27.04■■□□□ 1.92
TNFRSF4-201ENST00000379236 RXFP1Q9HBX9 757 aa27.04■■□□□ 1.92
TNFRSF4-201ENST00000379236 CHST7Q9NS84 486 aa27.04■■□□□ 1.92
TNFRSF4-201ENST00000379236 NPHP3-ACAD11A0A0J9YXS1 232 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 KIF4AO95239 1232 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 EFEMP2O95967 443 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 MCF2P10911 925 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 PLCG1P19174 1290 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms