RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 BSNDQ8WZ55 320 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 RFFLQ8WZ73 363 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 POLR3CQ9BUI4 534 aaPredicted RBP12.49□□□□□ -0.41
DDR1-227ENST00000376570 NGRNQ9NPE2 291 aaKnown RBP12.49□□□□□ -0.41
DDR1-227ENST00000376570 A1CFQ9NQ94 594 aaKnown RBP12.49□□□□□ -0.41
DDR1-227ENST00000376570 RAB20Q9NX57 234 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 TCRBV7S2A1N4TA0A589 114 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 NFX1Q12986 1120 aaKnown RBP12.49□□□□□ -0.41
DDR1-227ENST00000376570 NAA25Q14CX7 972 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 EMC1Q8N766 993 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 FAM149B1Q96BN6 582 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 PLVAPQ9BX97 442 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 TTYH3Q9C0H2 523 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 MTMR12Q9C0I1 747 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 PXMP2Q9NR77 195 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 COL14A1Q05707 1796 aaKnown RBP12.49□□□□□ -0.41
DDR1-227ENST00000376570 NUP188Q5SRE5 1749 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 CCDC78A2IDD5 438 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 PLSCR1O15162 318 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 GNA15P30679 374 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 CLK2P49760 499 aaKnown RBP12.49□□□□□ -0.41
DDR1-227ENST00000376570 DRP2Q13474 957 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 EMC2Q15006 297 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 Q4G0T1 1027 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 CASC4Q6P4E1 433 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 FBXO25Q8TCJ0 367 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 SEMA4DQ92854 862 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 MKL1Q969V6 931 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 GANQ9H2C0 597 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 E2F8A0AVK6 867 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 SPAG7O75391 227 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 VIL1P09327 827 aaKnown RBP12.48□□□□□ -0.41
DDR1-227ENST00000376570 IRAK1P51617 712 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 HIRAP54198 1017 aaPredicted RBP12.48□□□□□ -0.41
DDR1-227ENST00000376570 KRT76Q01546 638 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 TMED2Q15363 201 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 NOP9Q86U38 636 aaKnown RBP12.48□□□□□ -0.41
DDR1-227ENST00000376570 ZC3H18Q86VM9 953 aaKnown RBP12.48□□□□□ -0.41
DDR1-227ENST00000376570 ZNF354CQ86Y25 554 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 ANKMY2Q8IV38 441 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 CCDC63Q8NA47 563 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 UBA3Q8TBC4 463 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 HEXIM2Q96MH2 286 aaKnown RBP12.48□□□□□ -0.41
DDR1-227ENST00000376570 MOV10L1Q9BXT6 1211 aaKnown RBP12.48□□□□□ -0.41
DDR1-227ENST00000376570 SEPT10Q9P0V9 454 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDR1-227ENST00000376570 PKD1L3Q7Z443 1732 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 TLR3O15455 904 aaKnown RBP12.48□□□□□ -0.41
DDR1-227ENST00000376570 IRF2BP2Q7Z5L9 587 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 FAM49BQ9NUQ9 324 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 HEY1Q9Y5J3 304 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 IGLV3-22A0A075B6J6 115 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 A0A087WUV0 522 aaPredicted RBP12.48□□□□□ -0.41
DDR1-227ENST00000376570 A0A1W2PQJ5 194 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 TBX3O15119 743 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 VTNP04004 478 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 TXNP10599 105 aaKnown RBP12.48□□□□□ -0.41
DDR1-227ENST00000376570 SUPT20HL1Q3ZLR7 823 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 ZBTB8OSQ8IWT0 167 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 MSANTD4Q8NCY6 345 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 TAF1DQ9H5J8 278 aaPredicted RBP12.48□□□□□ -0.41
DDR1-227ENST00000376570 NRBP2Q9NSY0 501 aa12.48□□□□□ -0.41
DDR1-227ENST00000376570 TCF7P36402 384 aaPredicted RBP12.47□□□□□ -0.41
DDR1-227ENST00000376570 BASP1P80723 227 aaKnown RBP12.47□□□□□ -0.41
DDR1-227ENST00000376570 TREML2Q5T2D2 321 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 ANO5Q75V66 913 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 EFCAB13Q8IY85 973 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 KIRREL3Q8IZU9 778 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 RNF10Q8N5U6 811 aaKnown RBP12.47□□□□□ -0.41
DDR1-227ENST00000376570 CPB2Q96IY4 423 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 RAB17Q9H0T7 212 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 KLK14Q9P0G3 267 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 PARP2Q9UGN5 583 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 SIPA1L3O60292 1781 aaPredicted RBP12.47□□□□□ -0.41
DDR1-227ENST00000376570 ROBO3Q96MS0 1386 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 SAT1P21673 171 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 CIITAP33076 1130 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 TNFSF9P41273 254 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 TMEM132BQ14DG7 1078 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 KYNUQ16719 465 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 MAP1SQ66K74 1059 aaPredicted RBP12.47□□□□□ -0.41
DDR1-227ENST00000376570 OR6B2Q6IFH4 312 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 DNAJC24Q6P3W2 148 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 SRRM1Q8IYB3 904 aaKnown RBP12.47□□□□□ -0.41
DDR1-227ENST00000376570 PRPF31Q8WWY3 499 aaKnown RBP12.47□□□□□ -0.41
DDR1-227ENST00000376570 ALG3Q92685 438 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 ELAC2Q9BQ52 826 aaKnown RBP12.47□□□□□ -0.41
DDR1-227ENST00000376570 MAK16Q9BXY0 300 aaKnown RBP12.47□□□□□ -0.41
DDR1-227ENST00000376570 CYP3A7-CYP3A51PA0A087WV96 503 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 PDGFRBP09619 1106 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 ATF2P15336 505 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 TUBB4BP68371 445 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 SPIRE1Q08AE8 756 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 BBS9Q3SYG4 887 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 FAXCQ5TGI0 409 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 CCDC91Q7Z6B0 441 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 GPD1LQ8N335 351 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 EFCC1Q9HA90 598 aa12.47□□□□□ -0.41
DDR1-227ENST00000376570 SMCHD1A6NHR9 2005 aa12.46□□□□□ -0.41
DDR1-227ENST00000376570 ECEL1O95672 775 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms