RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FNBP1Q96RU3 617 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PARD6BQ9BYG5 372 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 SUGCTQ9HAC7 445 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 RBAKQ9NYW8 714 aaPredicted RBP19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 RAB21Q9UL25 225 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 COL1A2P08123 1366 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ZNF185O15231 689 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ASAP2O43150 1006 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TOM1L1O75674 476 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 C4BPAP04003 597 aaKnown RBP19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ACOT2P49753 483 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 GALCP54803 685 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TFDP1Q14186 410 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 NFRKBQ6P4R8 1299 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 LRRC71Q8N4P6 559 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 LRRC57Q8N9N7 239 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 NOA1Q8NC60 698 aaKnown RBP19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CAPZA3Q96KX2 299 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CGRRF1Q99675 332 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CCDC94Q9BW85 323 aaPredicted RBP19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 EPC1Q9H2F5 836 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ZCCHC17Q9NP64 241 aaKnown RBP19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ANKFY1Q9P2R3 1169 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 SUCLA2Q9P2R7 463 aaPredicted RBP19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 RNF14Q9UBS8 474 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 SLC15A5A6NIM6 579 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PDE2AO00408 941 aaPredicted RBP19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 FAM189A1O60320 539 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 C22orf31O95567 290 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PRKCBP05771 671 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 GRM1Q13255 1194 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 BRD3Q15059 726 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MAPK6Q16659 721 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CST9Q5W186 159 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 DPP9Q86TI2 863 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MSL3Q8N5Y2 521 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 RNF149Q8NC42 400 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TPCN2Q8NHX9 752 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CAGE1Q8TC20 777 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 EPS8L1Q8TE68 723 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 COG1Q8WTW3 980 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ACO2Q99798 780 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 NFKBIZQ9BYH8 718 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 NOCTQ9UK39 431 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CNTNAP2Q9UHC6 1331 aa19.42■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CCDC151A5D8V7 595 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CES2O00748 559 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CLDN3O15551 220 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 NCK2O43639 380 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 HOXD8P13378 290 aaPredicted RBP19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 WNT7BP56706 349 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 POU5F1BQ06416 359 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 IRF5Q13568 498 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 SLFN11Q7Z7L1 901 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 BRSK2Q8IWQ3 736 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 SLC20A1Q8WUM9 679 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 LMBR1Q8WVP7 490 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 RFFLQ8WZ73 363 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 RNPEPQ9H4A4 650 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PDE11AQ9HCR9 933 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ZNF446Q9NWS9 450 aa19.41■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ANKRD62A6NC57 917 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ABLIM1O14639 778 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TNNI1P19237 187 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PROZP22891 400 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ADCYAP1R1P41586 468 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MATR3P43243 847 aaKnown RBP eCLIP19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MCL1Q07820 350 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TCEAL1Q15170 157 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TDRD10Q5VZ19 366 aaKnown RBP19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 EFCAB12Q6NXP0 572 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TMCO3Q6UWJ1 677 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 LINC01465Q8N7H1 131 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TRAPPC12Q8WVT3 735 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CALR3Q96L12 384 aaKnown RBP19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TINF2Q9BSI4 451 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ISCUQ9H1K1 167 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ABHD16BQ9H3Z7 469 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 FZD8Q9H461 694 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 C1orf112Q9NSG2 853 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PTPRJQ12913 1337 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ACKR2O00590 384 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MAGEB2O15479 319 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PPFIA4O75335 1185 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ZRANB2O95218 330 aaKnown RBP eCLIP19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 FTCDO95954 541 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 HLA-DRAP01903 254 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 SRGAP2CP0DJJ0 459 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 AP3M2P53677 418 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PTENP60484 403 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 DUSP28Q4G0W2 176 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ZBTB41Q5SVQ8 909 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 GJC2Q5T442 439 aaPredicted RBP19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 RHPN2Q8IUC4 686 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 RPUSD2Q8IZ73 545 aaKnown RBP19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 SYCE1Q8N0S2 351 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 AFG1LQ8WV93 481 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CTNNBL1Q8WYA6 563 aaPredicted RBP19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 SLC5A4Q9NY91 659 aa19.4■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TTLL13PA6NNM8 815 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms