RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 BTN2A2Q8WVV5 523 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 SLC13A1Q9BZW2 595 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 PCSK1NQ9UHG2 260 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 ZNF746Q6NUN9 644 aaPredicted RBP15.17■□□□□ 0.02
TRAF1-201ENST00000373887 LRRC7Q96NW7 1537 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 IKBKBO14920 756 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 HNRNPH2P55795 449 aaKnown RBP15.16■□□□□ 0.02
TRAF1-201ENST00000373887 MRPS15P82914 257 aaKnown RBP15.16■□□□□ 0.02
TRAF1-201ENST00000373887 EXOC4Q96A65 974 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 OSBPL1AQ9BXW6 950 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 SIK2Q9H0K1 926 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 ZSCAN32Q9NX65 697 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 ABCA6Q8N139 1617 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 NDUFB10O96000 172 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 ZBED6P86452 979 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 MRPL28Q13084 256 aaKnown RBP15.16■□□□□ 0.02
TRAF1-201ENST00000373887 MDH1BQ5I0G3 518 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 MB21D1Q8N884 522 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 TTC8Q8TAM2 541 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 UBE4BO95155 1302 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 NTSR2O95665 410 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 HIF1AQ16665 826 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 PATL1Q86TB9 770 aaKnown RBP15.16■□□□□ 0.02
TRAF1-201ENST00000373887 SH3KBP1Q96B97 665 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 ADAM22Q9P0K1 906 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 ZNF212Q9UDV6 495 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 TRIM33Q9UPN9 1127 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 RARBP10826 455 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 TRIM60Q495X7 471 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 BARGINQ6ZT62 677 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 VSTM4Q8IW00 320 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 ATXN7L3BQ96GX2 97 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 ASPSCR1Q9BZE9 553 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 SLC7A5P2Q9GIP4 190 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 HAUS5O94927 633 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 GRIK1P39086 918 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 AP2B1P63010 937 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 LRRC14Q15048 493 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 TOGARAM2Q6ZUX3 1019 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 ICA1LQ8NDH6 482 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 SCG3Q8WXD2 468 aaKnown RBP15.16■□□□□ 0.02
TRAF1-201ENST00000373887 FAM20AQ96MK3 541 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 C11orf70Q9BRQ4 267 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 RNF14Q9UBS8 474 aa15.16■□□□□ 0.02
TRAF1-201ENST00000373887 LRRC63Q05C16 580 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 BZW1Q7L1Q6 419 aaKnown RBP15.15■□□□□ 0.02
TRAF1-201ENST00000373887 YAF2Q8IY57 180 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 NEDD1Q8NHV4 660 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 NDFIP2Q9NV92 336 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 RIMBP3CA6NJZ7 1639 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 RIMBP3BA6NNM3 1639 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 RIMBP3Q9UFD9 1639 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 UBA6A0AVT1 1052 aaPredicted RBP15.15■□□□□ 0.02
TRAF1-201ENST00000373887 EFCAB14O75071 495 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 MAGOHP61326 146 aaKnown RBP15.15■□□□□ 0.02
TRAF1-201ENST00000373887 PPM1NQ8N819 430 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 GOLPH3LQ9H4A5 285 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 PRCPP42785 496 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 VAMP7P51809 220 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 HDAC4P56524 1084 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 AP1B1Q10567 949 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 RBAKQ9NYW8 714 aaPredicted RBP15.15■□□□□ 0.02
TRAF1-201ENST00000373887 PCDHA10Q9Y5I2 948 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 HPCAL4Q9UM19 191 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 LAMC1P11047 1609 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 TRIM49P0CI25 452 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 TRIM49CP0CI26 452 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 GGCXP38435 758 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 PPP1R18Q6NYC8 613 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 ALKBH5Q6P6C2 394 aaKnown RBP15.15■□□□□ 0.02
TRAF1-201ENST00000373887 FBXO38Q6PIJ6 1188 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 HPS3Q969F9 1004 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 MTBPQ96DY7 904 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 C2orf40Q9H1Z8 148 aa15.15■□□□□ 0.02
TRAF1-201ENST00000373887 RIMS1Q86UR5 1692 aaKnown RBP15.15■□□□□ 0.02
TRAF1-201ENST00000373887 POLRMTO00411 1230 aaKnown RBP15.14■□□□□ 0.01
TRAF1-201ENST00000373887 TAS2R42Q7RTR8 314 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 TMCO5AQ8N6Q1 288 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 LRRC37BQ96QE4 947 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 TRIM45Q9H8W5 580 aaPredicted RBP15.14■□□□□ 0.01
TRAF1-201ENST00000373887 RRAGCQ9HB90 399 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 HMBSP08397 361 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 TRPC1P48995 793 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 DMC1Q14565 340 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 SLC10A5Q5PT55 438 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 PBXIP1Q96AQ6 731 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 AGBL1Q96MI9 1066 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 SYTL2Q9HCH5 934 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 CNOT8Q9UFF9 292 aaKnown RBP15.14■□□□□ 0.01
TRAF1-201ENST00000373887 AURKCQ9UQB9 309 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 ZNF211Q13398 564 aaPredicted RBP15.14■□□□□ 0.01
TRAF1-201ENST00000373887 CYTH1Q15438 398 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 STYK1Q6J9G0 422 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 SPON2Q9BUD6 331 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 TEX13BQ9BXU2 312 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 ADNPQ9H2P0 1102 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 CCDC151A5D8V7 595 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 KIF28PB7ZC32 967 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 IRF1P10914 325 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms