RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 SLC5A4Q9NY91 659 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 A0A0A6YYK5 440 aaPredicted RBP26.97■■□□□ 1.91
CTSA-203ENST00000372459 ASAP2O43150 1006 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 TOM1L1O75674 476 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 ITGBL1O95965 494 aaPredicted RBP26.97■■□□□ 1.91
CTSA-203ENST00000372459 PRKCBP05771 671 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 FAM71AQ8IYT1 594 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 CAGE1Q8TC20 777 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 AFG1LQ8WV93 481 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 SHC3Q92529 594 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 ZNF516Q92618 1163 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 FAM81BQ96LP2 452 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 OSBPL9Q96SU4 736 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 TINF2Q9BSI4 451 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 ABHD16BQ9H3Z7 469 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 USP8P40818 1118 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 METTL13Q8N6R0 699 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 MMS19Q96T76 1030 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 TLR10Q9BXR5 811 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 EPC1Q9H2F5 836 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 PDE11AQ9HCR9 933 aa26.97■■□□□ 1.91
CTSA-203ENST00000372459 SEPT11Q9NVA2 429 aaKnown RBP26.97■■□□□ 1.91
CTSA-203ENST00000372459 ZNF185O15231 689 aa26.96■■□□□ 1.91
CTSA-203ENST00000372459 C22orf31O95567 290 aa26.96■■□□□ 1.91
CTSA-203ENST00000372459 NOP2P46087 812 aaKnown RBP26.96■■□□□ 1.91
CTSA-203ENST00000372459 PRPF4BQ13523 1007 aaKnown RBP26.96■■□□□ 1.91
CTSA-203ENST00000372459 ZACNQ401N2 412 aa26.96■■□□□ 1.91
CTSA-203ENST00000372459 ENOSF1Q7L5Y1 443 aa26.96■■□□□ 1.91
CTSA-203ENST00000372459 DNAAF5Q86Y56 855 aa26.96■■□□□ 1.91
CTSA-203ENST00000372459 ACO2Q99798 780 aaKnown RBP26.96■■□□□ 1.91
CTSA-203ENST00000372459 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.95■■□□□ 1.91
CTSA-203ENST00000372459 PPFIA4O75335 1185 aa26.95■■□□□ 1.91
CTSA-203ENST00000372459 GALCP54803 685 aa26.95■■□□□ 1.91
CTSA-203ENST00000372459 GRID2IPA4D2P6 1211 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 NCK2O43639 380 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 C4BPAP04003 597 aaKnown RBP26.95■■□□□ 1.9
CTSA-203ENST00000372459 INSRRP14616 1297 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 ZNF157P51786 506 aaPredicted RBP26.95■■□□□ 1.9
CTSA-203ENST00000372459 CLCN3P51790 818 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 GCNT1Q02742 428 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 ACVR2BQ13705 512 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 DUSP28Q4G0W2 176 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 ZBTB41Q5SVQ8 909 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 LMBRD2Q68DH5 695 aaPredicted RBP26.95■■□□□ 1.9
CTSA-203ENST00000372459 CHADLQ6NUI6 762 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 NFRKBQ6P4R8 1299 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 RASAL3Q86YV0 1011 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 MSL3Q8N5Y2 521 aaKnown RBP26.95■■□□□ 1.9
CTSA-203ENST00000372459 NLRP4Q96MN2 994 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 CGRRF1Q99675 332 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 TCHPQ9BT92 498 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 C1orf112Q9NSG2 853 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 CPA4Q9UI42 421 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 TRPM7Q96QT4 1865 aa26.95■■□□□ 1.9
CTSA-203ENST00000372459 ZNF236Q9UL36 1845 aa26.94■■□□□ 1.9
CTSA-203ENST00000372459 MANSC4A6NHS7 340 aaPredicted RBP26.94■■□□□ 1.9
CTSA-203ENST00000372459 MAGEB2O15479 319 aa26.94■■□□□ 1.9
CTSA-203ENST00000372459 TMEM253P0C7T8 217 aa26.94■■□□□ 1.9
CTSA-203ENST00000372459 HARSP12081 509 aaKnown RBP26.94■■□□□ 1.9
CTSA-203ENST00000372459 WNT7BP56706 349 aa26.94■■□□□ 1.9
CTSA-203ENST00000372459 IGBP1P78318 339 aa26.94■■□□□ 1.9
CTSA-203ENST00000372459 CREG2Q8IUH2 290 aa26.94■■□□□ 1.9
CTSA-203ENST00000372459 NPLOC4Q8TAT6 608 aa26.94■■□□□ 1.9
CTSA-203ENST00000372459 PARD6BQ9BYG5 372 aa26.94■■□□□ 1.9
CTSA-203ENST00000372459 ZCCHC17Q9NP64 241 aaKnown RBP26.94■■□□□ 1.9
CTSA-203ENST00000372459 TTLL13PA6NNM8 815 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 WDR44Q5JSH3 913 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 MEI1Q5TIA1 1274 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 TDRD10Q5VZ19 366 aaKnown RBP26.93■■□□□ 1.9
CTSA-203ENST00000372459 SLC20A1Q8WUM9 679 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 TATDN2Q93075 761 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 ZHX1Q9UKY1 873 aaPredicted RBP26.93■■□□□ 1.9
CTSA-203ENST00000372459 COL1A2P08123 1366 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 CNTNAP2Q9UHC6 1331 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 TMCO5BA8MYB1 307 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 FTCDO95954 541 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 SMPD1P17405 629 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 BIRC3Q13489 604 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 IQSEC1Q6DN90 963 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 RPUSD2Q8IZ73 545 aaKnown RBP26.93■■□□□ 1.9
CTSA-203ENST00000372459 EPS8L1Q8TE68 723 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 COG1Q8WTW3 980 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 LMBR1Q8WVP7 490 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 CTNNBL1Q8WYA6 563 aaPredicted RBP26.93■■□□□ 1.9
CTSA-203ENST00000372459 PKNOX2Q96KN3 472 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 C16orf70Q9BSU1 422 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 FZD8Q9H461 694 aa26.93■■□□□ 1.9
CTSA-203ENST00000372459 ACKR2O00590 384 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 CYP26A1O43174 497 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 SGPL1O95470 568 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 HLA-DRAP01903 254 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 ZNF286BP0CG31 522 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 PIK3CAP42336 1068 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 PTENP60484 403 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 MCL1Q07820 350 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 ZBTB33Q86T24 672 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 BRSK2Q8IWQ3 736 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 MSANTD4Q8NCY6 345 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 PI4K2AQ9BTU6 479 aa26.92■■□□□ 1.9
CTSA-203ENST00000372459 NFKBIZQ9BYH8 718 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms