RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 HSPH1Q92598 858 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 PITPNM3Q9BZ71 974 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 DONSONQ9NYP3 566 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 RBAKQ9NYW8 714 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 AGO2Q9UKV8 859 aaKnown RBP14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 NFKBIAP25963 317 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 PGBD4Q96DM1 585 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 ATG4CQ96DT6 458 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 ZNF560Q96MR9 790 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 TMEM60Q9H2L4 133 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 CXorf56Q9H5V9 222 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 ZWILCHQ9H900 591 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 GEMIN8Q9NWZ8 242 aaKnown RBP14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 SCHIP1Q9P0W5 487 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 SPDYE2BA6NHP3 402 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 LGALS16A8MUM7 142 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 SPDYE6P0CI01 402 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 CAP2P40123 477 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 CPT1AP50416 773 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 NAALADL2Q58DX5 795 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 KRT80Q6KB66 452 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.12□□□□□ -0.157e-7■■■□□ 18.6
RAPGEF1-201ENST00000372189 PHF20Q9BVI0 1012 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 NDEL1Q9GZM8 345 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 FAM217BQ9NTX9 383 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 ITGB1BP2Q9UKP3 347 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 BNIP3LO60238 219 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 TOM1L1O75674 476 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 CPB1P15086 417 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 CASP1P29466 404 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 SPARCL1Q14515 664 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 GBA2Q9HCG7 927 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 UBN1Q9NPG3 1134 aa14.12□□□□□ -0.15
RAPGEF1-201ENST00000372189 GMNCA6NCL1 334 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 PALMO75781 387 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 CTSHP09668 335 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 CA4P22748 312 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 RGS2P41220 211 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 RINLQ6ZS11 566 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 CENPUQ71F23 418 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 BZW1Q7L1Q6 419 aaKnown RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 HAUS6Q7Z4H7 955 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 GOLPH3LQ9H4A5 285 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 SMYD2Q9NRG4 433 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 ORC6Q9Y5N6 252 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 TRIM49BA6NDI0 452 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 POLRMTO00411 1230 aaKnown RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 FGGP02679 453 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 PRCPP42785 496 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 KPNA2P52292 529 aaKnown RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 ALKBH5Q6P6C2 394 aaKnown RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 ERO1BQ86YB8 467 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 NDUFAF2Q8N183 169 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 SYT2Q8N9I0 419 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 AFG1LQ8WV93 481 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 CEP72Q9P209 647 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 MAGEB2O15479 319 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 DGAT1O75907 488 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 GET4Q7L5D6 327 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 HDDC2Q7Z4H3 204 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 RRAGCQ9HB90 399 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 RGL1Q9NZL6 768 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 KIF20BQ96Q89 1820 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 KIF28PB7ZC32 967 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 ANKRD65E5RJM6 399 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 SRGAP2O75044 1071 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 SPAG7O75391 227 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 DGKDQ16760 1214 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 AGBL1Q96MI9 1066 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 NGRNQ9NPE2 291 aaKnown RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 ADAM22Q9P0K1 906 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 MID2Q9UJV3 735 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 TBX3O15119 743 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 ZNF189O75820 626 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 VEGFAP15692 232 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 TRIP13Q15645 432 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 FMR1NBQ8N0W7 255 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 PARD3BQ8TEW8 1205 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 LCMT1Q9UIC8 334 aa14.11□□□□□ -0.15
RAPGEF1-201ENST00000372189 GRID2IPA4D2P6 1211 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 M0QYV0 167 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 TFRCP02786 760 aaKnown RBP14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 CUL3Q13618 768 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 JMJD4Q9H9V9 463 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 LRPAP1P30533 357 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 ART3Q13508 389 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 THOC5Q13769 683 aaKnown RBP14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 NLRP14Q86W24 1093 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 RFWD2Q8NHY2 731 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 PIP4K2CQ8TBX8 421 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 SCFD2Q8WU76 684 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 MAML1Q92585 1016 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 CCDC138Q96M89 665 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 STRIP2Q9ULQ0 834 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 UBE4BO95155 1302 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 USP27XA6NNY8 438 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 PPP2R2AP63151 447 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 KCNH2Q12809 1159 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 XRRA1Q6P2D8 792 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 RNF180Q86T96 592 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms