RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ADAMTS12P58397 1594 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 LOC102724428A0A0B4J2F2 783 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 KCNN4O15554 427 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 SIK1P57059 783 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 ABCE1P61221 599 aaKnown RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 KLC1Q07866 573 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 DHX40Q8IX18 779 aaKnown RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 GGT7Q9UJ14 662 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 ABCB11O95342 1321 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 CDC42BPGQ6DT37 1551 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 CASP1P29466 404 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 ERFP50548 548 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 HSPA2P54652 639 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 PROSER3Q2NL68 480 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 IZUMO3Q5VZ72 239 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 MCPH1Q8NEM0 835 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 PCDHA6Q9UN73 950 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 PCDHA8Q9Y5H6 950 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 IRX1P78414 480 aaPredicted RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 TAP1Q03518 808 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 TRADDQ15628 312 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 FAM102AQ5T9C2 384 aaPredicted RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 COG1Q8WTW3 980 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 EME1Q96AY2 570 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 C11orf70Q9BRQ4 267 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 BRD8Q9H0E9 1235 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 PRG3Q9Y2Y8 225 aaPredicted RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 FAM32AQ9Y421 112 aaKnown RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 LONP2Q86WA8 852 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 HSPBP1Q9NZL4 362 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 TMA7Q9Y2S6 64 aaKnown RBP13.13□□□□□ -0.31
HCFC1-202ENST00000369984 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 FAM187AA6NFU0 413 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 LARGE1O95461 756 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 TRIM72Q6ZMU5 477 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 TSSK1BQ9BXA7 367 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 USE1Q9NZ43 259 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 SPDYE5A6NIY4 337 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 CAPN1P07384 714 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 SPDYE7PQ495Y7 208 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 ANKRD40Q6AI12 368 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 PODNQ7Z5L7 613 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 SEC31BQ9NQW1 1179 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 PAPOLBQ9NRJ5 636 aaKnown RBP13.13□□□□□ -0.31
HCFC1-202ENST00000369984 ZFATQ9P243 1243 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 STAP1Q9ULZ2 295 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 MYO1GB0I1T2 1018 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 TSC22D2O75157 780 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 ANKMY2Q8IV38 441 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 CCDC103Q8IW40 242 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 RAB42Q8N4Z0 105 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 TMEM245Q9H330 911 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 DHX35Q9H5Z1 703 aaKnown RBP13.13□□□□□ -0.31
HCFC1-202ENST00000369984 TTC37Q6PGP7 1564 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 KCNA3P22001 575 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 SFR1Q86XK3 245 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 C5orf58C9J3I9 102 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 BCAR1P56945 870 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 LRRC74AQ0VAA2 488 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 C16orf89Q6UX73 402 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 SPATA21Q7Z572 469 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 CDKL3Q8IVW4 592 aaPredicted RBP13.13□□□□□ -0.31
HCFC1-202ENST00000369984 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 CYFIP2Q96F07 1278 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 MS4A14Q96JA4 679 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 SEPT3Q9UH03 358 aa13.13□□□□□ -0.31
HCFC1-202ENST00000369984 CDH2P19022 906 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-202ENST00000369984 HMOX2P30519 316 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 DAB2IPQ5VWQ8 1189 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 PKN3Q6P5Z2 889 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 RMDN3Q96TC7 470 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 ARHGEF3Q9NR81 526 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 TBX22Q9Y458 520 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 HNRNPRO43390 633 aaKnown RBP13.12□□□□□ -0.31
HCFC1-202ENST00000369984 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
HCFC1-202ENST00000369984 AP3B2Q13367 1082 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 ZCWPW1Q9H0M4 648 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 ARL2BPQ9Y2Y0 163 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 C16orf96A6NNT2 1141 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 CDH6P55285 790 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 NFX1Q12986 1120 aaKnown RBP13.12□□□□□ -0.31
HCFC1-202ENST00000369984 RABGAP1LQ5R372 815 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 RAD17O75943 681 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 COBLL1Q53SF7 1204 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 FAM83BQ5T0W9 1011 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 SCFD1Q8WVM8 642 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 ZFP42Q96MM3 310 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 BLOC1S6Q9UL45 172 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 RMDN1Q96DB5 314 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 SLC16A4O15374 487 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 MYCP01106 439 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-202ENST00000369984 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.12□□□□□ -0.31
HCFC1-202ENST00000369984 ZMYND8Q9ULU4 1186 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-202ENST00000369984 MORC2Q9Y6X9 1032 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-202ENST00000369984 ATP1A1P05023 1023 aaKnown RBP13.12□□□□□ -0.31
HCFC1-202ENST00000369984 LCP1P13796 627 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms