RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 NAT14Q8WUY8 206 aa19.12■□□□□ 0.65
CHTOP-201ENST00000368686 MCUR1Q96AQ8 359 aa19.12■□□□□ 0.65
CHTOP-201ENST00000368686 LENG1Q96BZ8 264 aaPredicted RBP19.12■□□□□ 0.65
CHTOP-201ENST00000368686 PPP1R14BQ96C90 147 aa19.12■□□□□ 0.65
CHTOP-201ENST00000368686 TYW1Q9NV66 732 aaKnown RBP19.12■□□□□ 0.65
CHTOP-201ENST00000368686 GTPBP10A4D1E9 387 aaKnown RBP19.11■□□□□ 0.65
CHTOP-201ENST00000368686 TP73O15350 636 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 PRPF4O43172 522 aaKnown RBP eCLIP19.11■□□□□ 0.65
CHTOP-201ENST00000368686 CHKAP35790 457 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 NT5C2P49902 561 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 INHBCP55103 352 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 CAV1Q03135 178 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 FYB2Q5VWT5 728 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 SPOCK2Q92563 424 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 KRT35Q92764 455 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 THAP2Q9H0W7 228 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 CYLDQ9NQC7 956 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 STK32BQ9NY57 414 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 COG5Q9UP83 839 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 GYG2O15488 501 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 CETPP11597 493 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 BPIFB4P59827 614 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 HERC4Q5GLZ8 1057 aaPredicted RBP19.11■□□□□ 0.65
CHTOP-201ENST00000368686 DCAF17Q5H9S7 520 aaPredicted RBP19.11■□□□□ 0.65
CHTOP-201ENST00000368686 SLC13A5Q86YT5 568 aaPredicted RBP19.11■□□□□ 0.65
CHTOP-201ENST00000368686 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.11■□□□□ 0.65
CHTOP-201ENST00000368686 DENND1AQ8TEH3 1009 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 EURLQ9NYK6 297 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 NINJ2Q9NZG7 142 aa19.11■□□□□ 0.65
CHTOP-201ENST00000368686 ARPP21Q9UBL0 812 aaPredicted RBP19.11■□□□□ 0.65
CHTOP-201ENST00000368686 ITGA2BP08514 1039 aa19.1■□□□□ 0.65
CHTOP-201ENST00000368686 NEK3P51956 506 aa19.1■□□□□ 0.65
CHTOP-201ENST00000368686 EVX2Q03828 476 aa19.1■□□□□ 0.65
CHTOP-201ENST00000368686 TMEM63BQ5T3F8 832 aa19.1■□□□□ 0.65
CHTOP-201ENST00000368686 MTDHQ86UE4 582 aaKnown RBP19.1■□□□□ 0.65
CHTOP-201ENST00000368686 SPATA24Q86W54 205 aa19.1■□□□□ 0.65
CHTOP-201ENST00000368686 SNF8Q96H20 258 aa19.1■□□□□ 0.65
CHTOP-201ENST00000368686 SYT11Q9BT88 431 aa19.1■□□□□ 0.65
CHTOP-201ENST00000368686 LRRC19Q9H756 370 aa19.1■□□□□ 0.65
CHTOP-201ENST00000368686 TRAF3IP3Q9Y228 551 aa19.1■□□□□ 0.65
CHTOP-201ENST00000368686 ROBO3Q96MS0 1386 aa19.1■□□□□ 0.65
CHTOP-201ENST00000368686 HNRNPRO43390 633 aaKnown RBP19.09■□□□□ 0.65
CHTOP-201ENST00000368686 PABPC4Q13310 644 aaKnown RBP eCLIP19.09■□□□□ 0.65
CHTOP-201ENST00000368686 Q4G0T1 1027 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 GJB7Q6PEY0 223 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 CCDC174Q6PII3 467 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 VPS52Q8N1B4 723 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 REXO1Q8N1G1 1221 aaKnown RBP19.09■□□□□ 0.65
CHTOP-201ENST00000368686 ARHGAP24Q8N264 748 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 PTCD3Q96EY7 689 aaKnown RBP19.09■□□□□ 0.65
CHTOP-201ENST00000368686 FAM163AQ96GL9 167 aaPredicted RBP19.09■□□□□ 0.65
CHTOP-201ENST00000368686 DDX27Q96GQ7 796 aaKnown RBP19.09■□□□□ 0.65
CHTOP-201ENST00000368686 MXD3Q9BW11 206 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 ETNK2Q9NVF9 386 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 SMG5Q9UPR3 1016 aaKnown RBP19.09■□□□□ 0.65
CHTOP-201ENST00000368686 NHSL1Q5SYE7 1610 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 ATP9BO43861 1147 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 HAUS5O94927 633 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 SPATA31D3P0C874 917 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 ETS2P15036 469 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 VAV1P15498 845 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 KCNJ1P48048 391 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 MARCKSL1P49006 195 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 KRT17Q04695 432 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 SPATA31D4Q6ZUB0 917 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 WDR66Q8TBY9 1149 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 MORC4Q8TE76 937 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 ECSITQ9BQ95 431 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 WNT8AQ9H1J5 351 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 TMEM165Q9HC07 324 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 DCP1AQ9NPI6 582 aaPredicted RBP19.09■□□□□ 0.65
CHTOP-201ENST00000368686 RHBDL2Q9NX52 303 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 ASIC3Q9UHC3 531 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 ZMYM2Q9UBW7 1377 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 COL18A1P39060 1754 aa19.09■□□□□ 0.65
CHTOP-201ENST00000368686 CCNFP41002 786 aa19.08■□□□□ 0.65
CHTOP-201ENST00000368686 TCEAL1Q15170 157 aa19.08■□□□□ 0.65
CHTOP-201ENST00000368686 TMED2Q15363 201 aa19.08■□□□□ 0.65
CHTOP-201ENST00000368686 SIX1Q15475 284 aaPredicted RBP19.08■□□□□ 0.65
CHTOP-201ENST00000368686 SBK1Q52WX2 424 aa19.08■□□□□ 0.65
CHTOP-201ENST00000368686 TCERG1LQ5VWI1 586 aa19.08■□□□□ 0.65
CHTOP-201ENST00000368686 IZUMO2Q6UXV1 221 aa19.08■□□□□ 0.65
CHTOP-201ENST00000368686 MAML1Q92585 1016 aa19.08■□□□□ 0.65
CHTOP-201ENST00000368686 PPP2R3CQ969Q6 453 aa19.08■□□□□ 0.65
CHTOP-201ENST00000368686 NSL1Q96IY1 281 aa19.08■□□□□ 0.65
CHTOP-201ENST00000368686 NDUFA13Q9P0J0 144 aa19.08■□□□□ 0.65
CHTOP-201ENST00000368686 KDM3AQ9Y4C1 1321 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 SMIM31A0A1B0GVY4 71 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 SLC37A4O43826 429 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 TROVE2P10155 538 aaKnown RBP eCLIP19.08■□□□□ 0.64
CHTOP-201ENST00000368686 TNFAIP3P21580 790 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 TFAP4Q01664 338 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 DEUP1Q05D60 604 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 ECM1Q16610 540 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 RNF207Q6ZRF8 634 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 SYDE1Q6ZW31 735 aaPredicted RBP19.08■□□□□ 0.64
CHTOP-201ENST00000368686 OTOAQ7RTW8 1153 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 TRABD2AQ86V40 505 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 WDR60Q8WVS4 1066 aa19.08■□□□□ 0.64
CHTOP-201ENST00000368686 STK33Q9BYT3 514 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms