RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 K7ESF4 209 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 POU2F2P09086 479 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 ZNF806P0C7X5 589 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 ITGA4P13612 1032 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 PABPC1LQ4VXU2 614 aaKnown RBP16.43■□□□□ 0.22
VAMP4-202ENST00000367740 PRR16Q569H4 304 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 TANGO2Q6ICL3 276 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 LONP2Q86WA8 852 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 FANCBQ8NB91 859 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 SLC7A14Q8TBB6 771 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 CLSTN3Q9BQT9 956 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 COLEC11Q9BWP8 271 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 NIFKQ9BYG3 293 aaKnown RBP16.43■□□□□ 0.22
VAMP4-202ENST00000367740 UBN1Q9NPG3 1134 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 IPPQ9Y573 584 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 SDK1Q7Z5N4 2213 aa16.43■□□□□ 0.22
VAMP4-202ENST00000367740 ADAMTS3O15072 1205 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 CHMP2AO43633 222 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 MAFO75444 373 aaPredicted RBP16.42■□□□□ 0.22
VAMP4-202ENST00000367740 NR1I2O75469 434 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 STBD1O95210 358 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 SPINK2P20155 84 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 FCARP24071 287 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 GRM2Q14416 872 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 SLC5A9Q2M3M2 681 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 MICU3Q86XE3 530 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 TMTC2Q8N394 836 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 FAM3CQ92520 227 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 ELSPBP1Q96BH3 223 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 MCRS1Q96EZ8 462 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 ADAM33Q9BZ11 813 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 ARRDC1-AS1Q9H2J1 176 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 BARHL2Q9NY43 387 aa16.42■□□□□ 0.22
VAMP4-202ENST00000367740 EML5Q05BV3 1969 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 hCG_1984214I3L0E3 225 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 ADAM12O43184 909 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 PAPSS2O95340 614 aaPredicted RBP16.41■□□□□ 0.22
VAMP4-202ENST00000367740 CHRNB1P11230 501 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 LIFRP42702 1097 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 FUT2Q10981 343 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 FOXC1Q12948 553 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 XKR3Q5GH77 459 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 HEATR6Q6AI08 1181 aaKnown RBP16.41■□□□□ 0.22
VAMP4-202ENST00000367740 B4GALNT3Q6L9W6 998 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 CEP68Q76N32 757 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 SPEM1Q8N4L4 309 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 ZNF713Q8N859 430 aaPredicted RBP16.41■□□□□ 0.22
VAMP4-202ENST00000367740 CNNM3Q8NE01 707 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 RABGGTAQ92696 567 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 GATA6Q92908 595 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 TMEM87BQ96K49 555 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 EIF2AQ9BY44 585 aaKnown RBP16.41■□□□□ 0.22
VAMP4-202ENST00000367740 GLT8D2Q9H1C3 349 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 UNC45AQ9H3U1 944 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 BRD9Q9H8M2 597 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 GDE1Q9NZC3 331 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 MRPS23Q9Y3D9 190 aaKnown RBP16.41■□□□□ 0.22
VAMP4-202ENST00000367740 HES2Q9Y543 173 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 SLC12A7Q9Y666 1083 aa16.41■□□□□ 0.22
VAMP4-202ENST00000367740 IGSF10Q6WRI0 2623 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 NRG2O14511 850 aaPredicted RBP16.4■□□□□ 0.22
VAMP4-202ENST00000367740 AXIN1O15169 862 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 EPN2O95208 641 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 CEBPBP17676 345 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 HOXC13P31276 330 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 SFNP31947 248 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 JAK3P52333 1124 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 PSMD5Q16401 504 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 GSTCDQ8NEC7 633 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 PIK3R5Q8WYR1 880 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 CACNG4Q9UBN1 327 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 COL4A3BPQ9Y5P4 624 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 PIAS3Q9Y6X2 628 aa16.4■□□□□ 0.22
VAMP4-202ENST00000367740 SF3B1O75533 1304 aaKnown RBP eCLIP16.4■□□□□ 0.224e-7■■■■■ 133.7
VAMP4-202ENST00000367740 TAF4O00268 1085 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 GIPC1O14908 333 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 MSH4O15457 936 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 TOP3BO95985 862 aaKnown RBP16.39■□□□□ 0.21
VAMP4-202ENST00000367740 CIITAP33076 1130 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 MCM5P33992 734 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 ZNF252P-AS1Q0IIN9 211 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 PTGDRQ13258 359 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 AXDND1Q5T1B0 1012 aaPredicted RBP16.39■□□□□ 0.21
VAMP4-202ENST00000367740 SRGAP1Q7Z6B7 1085 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 SMC5Q8IY18 1101 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 LNX1Q8TBB1 728 aaPredicted RBP16.39■□□□□ 0.21
VAMP4-202ENST00000367740 SMOC1Q9H4F8 434 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 C2orf42Q9NWW7 574 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 ARID2Q68CP9 1835 aa16.39■□□□□ 0.21
VAMP4-202ENST00000367740 RHOP08100 348 aa16.38■□□□□ 0.21
VAMP4-202ENST00000367740 NOVA1P51513 510 aaKnown RBP16.38■□□□□ 0.21
VAMP4-202ENST00000367740 PLA2G2CQ5R387 149 aa16.38■□□□□ 0.21
VAMP4-202ENST00000367740 Q6ZS52 159 aa16.38■□□□□ 0.21
VAMP4-202ENST00000367740 MAP4K3Q8IVH8 894 aa16.38■□□□□ 0.21
VAMP4-202ENST00000367740 EXOC6Q8TAG9 804 aa16.38■□□□□ 0.21
VAMP4-202ENST00000367740 HASPINQ8TF76 798 aa16.38■□□□□ 0.21
VAMP4-202ENST00000367740 ZCCHC14Q8WYQ9 949 aaKnown RBP16.38■□□□□ 0.21
VAMP4-202ENST00000367740 GJA10Q969M2 543 aa16.38■□□□□ 0.21
VAMP4-202ENST00000367740 LOXL4Q96JB6 756 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms