RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 AXDND1Q5T1B0 1012 aaPredicted RBP16.11■□□□□ 0.17
SF3B5-201ENST00000367569 PDE12Q6L8Q7 609 aaKnown RBP16.11■□□□□ 0.17
SF3B5-201ENST00000367569 SFR1Q86XK3 245 aa16.11■□□□□ 0.17
SF3B5-201ENST00000367569 MYCT1Q8N699 235 aa16.11■□□□□ 0.17
SF3B5-201ENST00000367569 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
SF3B5-201ENST00000367569 TCF25Q9BQ70 676 aa16.11■□□□□ 0.17
SF3B5-201ENST00000367569 MRPL9Q9BYD2 267 aaKnown RBP16.11■□□□□ 0.17
SF3B5-201ENST00000367569 NRDE2Q9H7Z3 1164 aa16.11■□□□□ 0.17
SF3B5-201ENST00000367569 MIOSQ9NXC5 875 aa16.11■□□□□ 0.17
SF3B5-201ENST00000367569 TBC1D7Q9P0N9 293 aa16.11■□□□□ 0.17
SF3B5-201ENST00000367569 STK17AQ9UEE5 414 aa16.11■□□□□ 0.17
SF3B5-201ENST00000367569 PCDHA7Q9UN72 937 aa16.11■□□□□ 0.17
SF3B5-201ENST00000367569 PIEZO1Q92508 2521 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 ZNF318Q5VUA4 2279 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 HIDE1A8MVS5 230 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 LOC730098B7Z3J9 87 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 F8W810 466 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 RECQL4O94761 1208 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
SF3B5-201ENST00000367569 CA8P35219 290 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 SLC11A1P49279 550 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 EFNA5P52803 228 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 KCNC3Q14003 757 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 PCBP1Q15365 356 aaKnown RBP eCLIP16.1■□□□□ 0.17
SF3B5-201ENST00000367569 SEZ6Q53EL9 994 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 GLRA4Q5JXX5 417 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 TMEM161BQ8NDZ6 487 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 KCNG4Q8TDN1 519 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 ZBTB45Q96K62 511 aaPredicted RBP16.1■□□□□ 0.17
SF3B5-201ENST00000367569 CDCA3Q99618 268 aaPredicted RBP16.1■□□□□ 0.17
SF3B5-201ENST00000367569 TIPINQ9BVW5 301 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 CDT1Q9H211 546 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 IKZF4Q9H2S9 585 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 ENTPD7Q9NQZ7 604 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 PUF60Q9UHX1 559 aaKnown RBP16.1■□□□□ 0.17
SF3B5-201ENST00000367569 ODF2LQ9ULJ1 636 aa16.1■□□□□ 0.17
SF3B5-201ENST00000367569 PRG3Q9Y2Y8 225 aaPredicted RBP16.1■□□□□ 0.17
SF3B5-201ENST00000367569 MAPTP10636 758 aaKnown RBP16.09■□□□□ 0.17
SF3B5-201ENST00000367569 CASP1P29466 404 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 DDIT3P35638 169 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 NCKAP1LP55160 1127 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 TMEM184AQ6ZMB5 413 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 CCDC73Q6ZRK6 1079 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 HFE2Q6ZVN8 426 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 SLC39A11Q8N1S5 342 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 LEO1Q8WVC0 666 aaPredicted RBP16.09■□□□□ 0.17
SF3B5-201ENST00000367569 AUTS2Q8WXX7 1259 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 SUSD6Q92537 303 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 DDX12PQ92771 950 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 BICD1Q96G01 975 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 SPATA32Q96LK8 384 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 ADPGKQ9BRR6 497 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 MRPL4Q9BYD3 311 aaKnown RBP16.09■□□□□ 0.17
SF3B5-201ENST00000367569 FGFBP2Q9BYJ0 223 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 PARVGQ9HBI0 331 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 NGRNQ9NPE2 291 aaKnown RBP16.09■□□□□ 0.17
SF3B5-201ENST00000367569 SPG21Q9NZD8 308 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 KCND2Q9NZV8 630 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 MORC2Q9Y6X9 1032 aaPredicted RBP16.09■□□□□ 0.17
SF3B5-201ENST00000367569 ANK1P16157 1881 aa16.09■□□□□ 0.17
SF3B5-201ENST00000367569 TISP43B9A030 160 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 IDEP14735 1019 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 PPM1AP35813 382 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 MATR3P43243 847 aaKnown RBP eCLIP16.08■□□□□ 0.16
SF3B5-201ENST00000367569 KRT85P78386 507 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 KRT17Q04695 432 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 STRN3Q13033 797 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 CBX2Q14781 532 aaPredicted RBP16.08■□□□□ 0.16
SF3B5-201ENST00000367569 E2F4Q16254 413 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 ZC2HC1CQ53FD0 456 aaPredicted RBP16.08■□□□□ 0.16
SF3B5-201ENST00000367569 ANKRD54Q6NXT1 300 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 LLGL2Q6P1M3 1020 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 SV2BQ7L1I2 683 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 TMC7Q7Z402 723 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 HAUS6Q7Z4H7 955 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 GRAMD1CQ8IYS0 662 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 TMEM130Q8N3G9 435 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 KCTD17Q8N5Z5 321 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 SPIRE2Q8WWL2 714 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 EDAQ92838 391 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 RPGRIP1Q96KN7 1286 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 RPS6KC1Q96S38 1066 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 ACO2Q99798 780 aaKnown RBP16.08■□□□□ 0.16
SF3B5-201ENST00000367569 PHF7Q9BWX1 381 aaPredicted RBP16.08■□□□□ 0.16
SF3B5-201ENST00000367569 S1PR5Q9H228 398 aa16.08■□□□□ 0.16
SF3B5-201ENST00000367569 LARSQ9P2J5 1176 aaKnown RBP16.08■□□□□ 0.16
SF3B5-201ENST00000367569 FSD2A1L4K1 749 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 ABLIM1O14639 778 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 TRAK2O60296 914 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 OR1G1P47890 313 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 ZNF131P52739 623 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 SMTNP53814 917 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 DCAF4L1Q3SXM0 396 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 RESP18Q5W5W9 173 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 SYCE2Q6PIF2 218 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 HACE1Q8IYU2 909 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 CNNM3Q8NE01 707 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 HASPINQ8TF76 798 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 HPS3Q969F9 1004 aa16.07■□□□□ 0.16
SF3B5-201ENST00000367569 DNAJC19Q96DA6 116 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms