RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PARP6Q2NL67 630 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 PRR16Q569H4 304 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CCNJQ5T5M9 372 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 LMBRD2Q68DH5 695 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 EPN2O95208 641 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 SLC5A1P13866 664 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 COPS2P61201 443 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 STX12Q86Y82 276 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 OTULINQ96BN8 352 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TEKT5Q96M29 485 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 BBS4Q96RK4 519 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 KPNA7A9QM74 516 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TJP3O95049 919 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF202O95125 648 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 SERPING1P05155 500 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 XRCC5P13010 732 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 GARSP41250 739 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 MAPKAPK2P49137 400 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 USP11P51784 963 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 SLC7A5Q01650 507 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 DNAJC28Q9NX36 388 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ABCA5Q8WWZ7 1642 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ESYT2A0FGR8 921 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 MCF2LO15068 1137 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 NUDT17P0C025 328 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 AP3S2P59780 193 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 MVKQ03426 396 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ZC3H12AQ5D1E8 599 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CRNKL1Q9BZJ0 848 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TMEM206Q9H813 350 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TAS2R1Q9NYW7 299 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TBX3O15119 743 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 DAPK3O43293 454 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 WDPCPO95876 746 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 VHLP40337 213 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 MTHFD1LQ6UB35 978 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 EGFL6Q8IUX8 553 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 GDAP1Q8TB36 358 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TRMT6Q9UJA5 497 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 A3GALT2U3KPV4 340 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 PNPLA6Q8IY17 1366 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CAPN9O14815 690 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CRY1Q16526 586 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ABHD8Q96I13 439 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 BEGAINQ9BUH8 593 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ARHGEF38Q9NXL2 777 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 LGALS16A8MUM7 142 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 P3H1Q32P28 736 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 UBLCP1Q8WVY7 318 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 HDAC2Q92769 488 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ADAMTS13Q76LX8 1427 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 GAS2O43903 313 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ORC4O43929 436 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 GJB2P29033 226 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 IGHMBP2P38935 993 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ABCB5Q2M3G0 1257 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 BORAQ6PGQ7 559 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 RDH11Q8TC12 318 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 GPHNQ9NQX3 736 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 POU1F1P28069 291 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TMEM121Q9BTD3 319 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 NAPBQ9H115 298 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TFECO14948 347 aaPredicted RBP3.96□□□□□ -1.77
SYNE1-207ENST00000367255 GZMAP12544 262 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 CENPCQ03188 943 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 KYNUQ16719 465 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 DCAF5Q96JK2 942 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF597Q96LX8 424 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 ANXA6P08133 673 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 IL4RP24394 825 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 PPP6R3Q5H9R7 873 aaPredicted RBP3.96□□□□□ -1.77
SYNE1-207ENST00000367255 ENC1O14682 589 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 ITIH2P19823 946 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 ITIH1P19827 911 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 CDC27P30260 824 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 HNRNPH3P31942 346 aaKnown RBP3.96□□□□□ -1.77
SYNE1-207ENST00000367255 EIF4A3P38919 411 aaKnown RBP3.96□□□□□ -1.77
SYNE1-207ENST00000367255 DAB2P98082 770 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 NKX1-1Q15270 411 aaPredicted RBP3.96□□□□□ -1.77
SYNE1-207ENST00000367255 GPATCH4Q5T3I0 446 aaKnown RBP3.96□□□□□ -1.77
SYNE1-207ENST00000367255 SNRPA1P09661 255 aaKnown RBP3.96□□□□□ -1.77
SYNE1-207ENST00000367255 S100A5P33763 92 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 HMGXB4Q9UGU5 601 aa3.96□□□□□ -1.77
SYNE1-207ENST00000367255 DNAJB6O75190 326 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 PRDX6P30041 224 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 GTF2H1P32780 548 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 S100A12P80511 92 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 STX5Q13190 355 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 SFMBT2Q5VUG0 894 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 COL23A1Q86Y22 540 aaPredicted RBP3.96□□□□□ -1.78
SYNE1-207ENST00000367255 AMER2Q8N7J2 671 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 AGBL1Q96MI9 1066 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 PNPLA8Q9NP80 782 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 DDX56Q9NY93 547 aaKnown RBP3.96□□□□□ -1.78
SYNE1-207ENST00000367255 GUCA1BQ9UMX6 200 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 CRB1P82279 1406 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 FLT1P17948 1338 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 FRMPD4Q14CM0 1322 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 MAGEB2O15479 319 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 TRIM25Q14258 630 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms