RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 SIX5Q8N196 739 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 SMG7Q92540 1137 aaKnown RBP13.74□□□□□ -0.21
MRPL55-209ENST00000366735 CPB2Q96IY4 423 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 PRIMPOLQ96LW4 560 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 EIF2AQ9BY44 585 aaKnown RBP13.74□□□□□ -0.21
MRPL55-209ENST00000366735 FNIP2Q9P278 1114 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 MYH11P35749 1972 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 VWA8A3KMH1 1905 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 SLITRK3O94933 977 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 ARF4P18085 180 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-209ENST00000366735 AFF1P51825 1210 aaKnown RBP13.73□□□□□ -0.21
MRPL55-209ENST00000366735 KIAA0319Q5VV43 1072 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 CCDC105Q8IYK2 499 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 MCPH1Q8NEM0 835 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 OXER1Q8TDS5 423 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 SNX27Q96L92 541 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 ZFP42Q96MM3 310 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 NXF3Q9H4D5 531 aaKnown RBP13.73□□□□□ -0.21
MRPL55-209ENST00000366735 TTC12Q9H892 705 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-209ENST00000366735 XPNPEP1Q9NQW7 623 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 PRMT7Q9NVM4 692 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-209ENST00000366735 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.73□□□□□ -0.21
MRPL55-209ENST00000366735 EPS15L1Q9UBC2 864 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 WNT16Q9UBV4 365 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 ADAM28Q9UKQ2 775 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 MYO15AQ9UKN7 3530 aa13.73□□□□□ -0.21
MRPL55-209ENST00000366735 PATJQ8NI35 1801 aa13.72□□□□□ -0.21
MRPL55-209ENST00000366735 LRRIQ4A6NIV6 560 aa13.72□□□□□ -0.21
MRPL55-209ENST00000366735 NPTXRO95502 500 aa13.72□□□□□ -0.21
MRPL55-209ENST00000366735 RARRES1P49788 294 aa13.72□□□□□ -0.21
MRPL55-209ENST00000366735 PDXDC1Q6P996 788 aa13.72□□□□□ -0.21
MRPL55-209ENST00000366735 ADPGKQ9BRR6 497 aa13.72□□□□□ -0.21
MRPL55-209ENST00000366735 POLR3FQ9H1D9 316 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-209ENST00000366735 C2orf40Q9H1Z8 148 aa13.72□□□□□ -0.21
MRPL55-209ENST00000366735 PARP2Q9UGN5 583 aa13.72□□□□□ -0.21
MRPL55-209ENST00000366735 HES2Q9Y543 173 aa13.72□□□□□ -0.21
MRPL55-209ENST00000366735 ZFP37Q9Y6Q3 630 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-209ENST00000366735 FAM186AA6NE01 2351 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 N4BP3O15049 544 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 MAP3K13O43283 966 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 USO1O60763 962 aaKnown RBP13.71□□□□□ -0.21
MRPL55-209ENST00000366735 TADA2AO75478 443 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 SRFP11831 508 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 XRCC6P12956 609 aaKnown RBP eCLIP13.71□□□□□ -0.21
MRPL55-209ENST00000366735 GLRA2P23416 452 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 ARL2P36404 184 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-209ENST00000366735 ELAVL2Q12926 359 aaKnown RBP13.71□□□□□ -0.21
MRPL55-209ENST00000366735 NR5A1Q13285 461 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 LIN9Q5TKA1 542 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 GET4Q7L5D6 327 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-209ENST00000366735 ASCL5Q7RTU5 278 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 FRMD5Q7Z6J6 570 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 ERMNQ8TAM6 284 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 ASAP3Q8TDY4 903 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 RIN2Q8WYP3 895 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-209ENST00000366735 HSD17B14Q9BPX1 270 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 CHST7Q9NS84 486 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.21
MRPL55-209ENST00000366735 PDCD11Q14690 1871 aaKnown RBP13.71□□□□□ -0.21
MRPL55-209ENST00000366735 DOCK6Q96HP0 2047 aa13.71□□□□□ -0.22
MRPL55-209ENST00000366735 CFAP54Q96N23 3096 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 A0A1B0GUA9 196 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 ZBTB39O15060 712 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 TGM5O43548 720 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 RFPL2O75678 378 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 PAPLNO95428 1278 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 EFEMP2O95967 443 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 CFHP08603 1231 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 AKAP5P24588 427 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 TXKP42681 527 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 TUSC3Q13454 348 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 HSP90AA2PQ14568 343 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-209ENST00000366735 ANGPT1Q15389 498 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 SAFBQ15424 915 aaKnown RBP eCLIP13.7□□□□□ -0.22
MRPL55-209ENST00000366735 AMHR2Q16671 573 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 ME3Q16798 604 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 ZC3H14Q6PJT7 736 aaKnown RBP13.7□□□□□ -0.22
MRPL55-209ENST00000366735 TAS1R1Q7RTX1 841 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 APBB1IPQ7Z5R6 666 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-209ENST00000366735 PALB2Q86YC2 1186 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 DTWD2Q8NBA8 298 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 GTF3C6Q969F1 213 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 PRKD2Q9BZL6 878 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 SEMA4AQ9H3S1 761 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 TUFT1Q9NNX1 390 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 GJB4Q9NTQ9 266 aa13.7□□□□□ -0.22
MRPL55-209ENST00000366735 GPR37O15354 613 aa13.69□□□□□ -0.22
MRPL55-209ENST00000366735 NPR3P17342 541 aa13.69□□□□□ -0.22
MRPL55-209ENST00000366735 PPP2R5AQ15172 486 aa13.69□□□□□ -0.22
MRPL55-209ENST00000366735 MAPK6Q16659 721 aa13.69□□□□□ -0.22
MRPL55-209ENST00000366735 FAM187BQ17R55 369 aa13.69□□□□□ -0.22
MRPL55-209ENST00000366735 EARS2Q5JPH6 523 aaKnown RBP13.69□□□□□ -0.22
MRPL55-209ENST00000366735 CDCA2Q69YH5 1023 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-209ENST00000366735 MTSS1LQ765P7 747 aa13.69□□□□□ -0.22
MRPL55-209ENST00000366735 GLYCTKQ8IVS8 523 aa13.69□□□□□ -0.22
MRPL55-209ENST00000366735 DIS3L2Q8IYB7 885 aaKnown RBP13.69□□□□□ -0.22
MRPL55-209ENST00000366735 PIGOQ8TEQ8 1089 aa13.69□□□□□ -0.22
MRPL55-209ENST00000366735 TNFRSF25Q93038 417 aa13.69□□□□□ -0.22
MRPL55-209ENST00000366735 TTPALQ9BTX7 342 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms