RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 TDP1Q9NUW8 608 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 RTEL1Q9NZ71 1219 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 RAD17O75943 681 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 ALDH2P05091 517 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 ITGB3P05106 788 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 ALOX15P16050 662 aaPredicted RBP5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 ATF3P18847 181 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 DDCP20711 480 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 ATP8B2P98198 1209 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 ICAM4Q14773 271 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 NFIXQ14938 502 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 PGS1Q32NB8 556 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 FAM47AQ5JRC9 791 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 PDZD4Q76G19 769 aaPredicted RBP5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 ZNF572Q7Z3I7 529 aaPredicted RBP5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 RSPH3Q86UC2 560 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 DRC7Q8IY82 874 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 ELOA2Q8IYF1 753 aaPredicted RBP5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 SLC35B2Q8TB61 432 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 Q8TCH9 128 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 CYFIP2Q96F07 1278 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 TMX3Q96JJ7 454 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 CLPTM1LQ96KA5 538 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 TAAR9Q96RI9 348 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 MAP3K14Q99558 947 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 ACO2Q99798 780 aaKnown RBP5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 MYOCQ99972 504 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 VRK1Q99986 396 aaPredicted RBP5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 MANSC1Q9H8J5 431 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 NMRK2Q9NPI5 230 aa5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 RUVBL1Q9Y265 456 aaKnown RBP5.55□□□□□ -1.52
RNU6-560P-201ENST00000364007 VSTM5A8MXK1 200 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 PATE3B3GLJ2 98 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 GPR32O75388 356 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 ALDH1A3P47895 512 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 FLT3LGP49771 235 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 ZNF280AP59817 542 aaPredicted RBP5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 CDC42EP1Q00587 391 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 MTM1Q13496 603 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 CSRP2Q16527 193 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 MINDY4Q4G0A6 757 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 KHDC1Q4VXA5 237 aaKnown RBP5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 GJC2Q5T442 439 aaPredicted RBP5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 AFMIDQ63HM1 303 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 SPTY2D1Q68D10 685 aaPredicted RBP5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 PPP4R3AQ6IN85 833 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 Q6ZSN1 163 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 D2HGDHQ8N465 521 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 PPP1R35Q8TAP8 253 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 NSUN6Q8TEA1 469 aaKnown RBP5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 DIS3LQ8TF46 1054 aaKnown RBP5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 RUNDC1Q96C34 613 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 C1GALT1C1Q96EU7 318 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 BORCS6Q96GS4 357 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 MRGPRX4Q96LA9 322 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 WWC2-AS2Q96NR7 200 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 LSM14BQ9BX40 385 aaKnown RBP5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 MSL2Q9HCI7 577 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 TMEM140Q9NV12 185 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 DDX20Q9UHI6 824 aaKnown RBP5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 CFAP20Q9Y6A4 193 aaKnown RBP5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 SLC30A1Q9Y6M5 507 aa5.54□□□□□ -1.52
RNU6-560P-201ENST00000364007 PNPLA7Q6ZV29 1317 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 CXorf49A8MYA2 514 aaPredicted RBP5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 SGTAO43765 313 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 CTNND1O60716 968 aaKnown RBP5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 DTNBO60941 627 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 ZNF623O75123 536 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 U2AF1L5P0DN76 240 aaPredicted RBP5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 RAP2AP10114 183 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 IL2RBP14784 551 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 MAP2K6P52564 334 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 U2AF1Q01081 240 aaKnown RBP eCLIP5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 SP140Q13342 867 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 ELAVL1Q15717 326 aaKnown RBP5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 ARHGAP29Q52LW3 1261 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 TTC7BQ86TV6 843 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 ZNF808Q8N4W9 903 aaPredicted RBP5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 DCBLD1Q8N8Z6 715 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 DNERQ8NFT8 737 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 IFI44Q8TCB0 444 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 CGRRF1Q99675 332 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 CPPED1Q9BRF8 314 aaPredicted RBP5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 SLC23A1Q9UHI7 598 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 ST6GALNAC2Q9UJ37 374 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 PCDHA3Q9Y5H8 950 aa5.53□□□□□ -1.52
RNU6-560P-201ENST00000364007 TBKBP1A7MCY6 615 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 FTLP02792 175 aaPredicted RBP5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 CTSWP56202 376 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 PLP2Q04941 152 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 SNAPC2Q13487 334 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 GFOD2Q3B7J2 385 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 POLNQ7Z5Q5 900 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 SGMS1Q86VZ5 419 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 CAMKK1Q8N5S9 505 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 MB21D1Q8N884 522 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 ZBTB34Q8NCN2 500 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 CASKIN2Q8WXE0 1202 aa5.52□□□□□ -1.53
RNU6-560P-201ENST00000364007 LOXL4Q96JB6 756 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms