RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 PODXL2Q9NZ53 605 aa3.42□□□□□ -1.86
RNU6-238P-201ENST00000363313 NUMBLQ9Y6R0 609 aa3.42□□□□□ -1.86
RNU6-238P-201ENST00000363313 ST20-MTHFSA0A0A6YYL1 179 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 DRGXA6NNA5 263 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 CBX4O00257 560 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 PCDH8O95206 1070 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 CELA2AP08217 269 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 SLC9A1P19634 815 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 PTGER1P34995 402 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 CRHR1P34998 444 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 UBE2R2Q712K3 238 aaPredicted RBP3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 THNSL2Q86YJ6 484 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 PASD1Q8IV76 773 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 MAPKAPK5Q8IW41 473 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 MSL3Q8N5Y2 521 aaKnown RBP3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 ADGRE3Q9BY15 652 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 KLK15Q9H2R5 256 aa3.41□□□□□ -1.86
RNU6-238P-201ENST00000363313 ARHGEF17Q96PE2 2063 aaPredicted RBP3.4□□□□□ -1.86
RNU6-238P-201ENST00000363313 ORC4O43929 436 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 FLT3LGP49771 235 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 CLRN1P58418 232 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 SSBP2P81877 361 aaPredicted RBP3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 FAM47AQ5JRC9 791 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 GJC2Q5T442 439 aaPredicted RBP3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 ANKS6Q68DC2 871 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 CRELD2Q6UXH1 353 aaPredicted RBP3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 LNX2Q8N448 690 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 OR56A1Q8NGH5 318 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 ACTRT2Q8TDY3 377 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 HASPINQ8TF76 798 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 FDXACB1Q9BRP7 624 aaPredicted RBP3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 CASS4Q9NQ75 786 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 KLHL11Q9NVR0 708 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 MAP3K2Q9Y2U5 619 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 ENTPD2Q9Y5L3 495 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZNF804BA4D1E1 1349 aa3.4□□□□□ -1.87
RNU6-238P-201ENST00000363313 WIPF3A6NGB9 483 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 ELL2O00472 640 aaPredicted RBP3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 EZH2Q15910 746 aaKnown RBP3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 ATXN7L2Q5T6C5 722 aaPredicted RBP3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 B3GNTL1Q67FW5 361 aaPredicted RBP3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 CREB3L3Q68CJ9 461 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 C11orf87Q6NUJ2 197 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 EFHBQ8N7U6 833 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 SNX33Q8WV41 574 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 RTF1Q92541 710 aaKnown RBP3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 MKL1Q969V6 931 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 SARAFQ96BY9 339 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 AIFM2Q9BRQ8 373 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 HIRIP3Q9BW71 556 aaPredicted RBP3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 MTFR1LQ9H019 292 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZMAT4Q9H898 229 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 TOMM22Q9NS69 142 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 FLRT1Q9NZU1 646 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 KCNE5Q9UJ90 142 aa3.39□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZMYM3Q14202 1370 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 WDR91A4D1P6 747 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 CCDC85CA6NKD9 419 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 MGST3O14880 152 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 ERN1O75460 977 aaKnown RBP3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 PRKCGP05129 697 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 ELANEP08246 267 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 SNRPA1P09661 255 aaKnown RBP3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 SERINC3Q13530 473 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 KIAA0895LQ68EN5 471 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 WASF1Q92558 559 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 FERMT2Q96AC1 680 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 ARMC5Q96C12 935 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 DEPDC7Q96QD5 511 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 NEU1Q99519 415 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 RNPEPQ9H4A4 650 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 OXSMQ9NWU1 459 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 KCTD5Q9NXV2 234 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 GPRC5DQ9NZD1 345 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZKSCAN5Q9Y2L8 839 aa3.38□□□□□ -1.87
RNU6-238P-201ENST00000363313 A0A1B0GTW7 788 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 OPA1O60313 960 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 PHF2O75151 1096 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 ITGA10O75578 1167 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 BMP15O95972 392 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 GPD1P21695 349 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 FOLR3P41439 243 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 CHN2P52757 468 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 PROK1P58294 105 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 CXADRP78310 365 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 MGAT5Q09328 741 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 AKNAD1Q5T1N1 836 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 DRC7Q8IY82 874 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 COLGALT2Q8IYK4 626 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 PDPRQ8NCN5 879 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 FCRL4Q96PJ5 515 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 SEMA4CQ9C0C4 833 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 IFT57Q9NWB7 429 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 KCNG1Q9UIX4 513 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 USP18Q9UMW8 372 aa3.37□□□□□ -1.87
RNU6-238P-201ENST00000363313 TRIM38O00635 465 aa3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 PHC1P78364 1004 aa3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 SRSF7Q16629 238 aaKnown RBP eCLIP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms