RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 STX19Q8N4C7 294 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 CCNYL1Q8N7R7 359 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 SEPT8Q92599 483 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 TXLNGQ9NUQ3 528 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 NYAP2Q9P242 653 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 NRBP1Q9UHY1 535 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 C3orf70A6NLC5 250 aaPredicted RBP11.59□□□□□ -0.55
CLIP1-203ENST00000361654 SULT1E1P49888 294 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 RMDN2Q96LZ7 410 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 ZMYND12Q9H0C1 365 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 GIMAP4Q9NUV9 329 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 APOBEC2Q9Y235 224 aaKnown RBP11.59□□□□□ -0.55
CLIP1-203ENST00000361654 ABCA8O94911 1581 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 KRT87PA6NCN2 255 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 SEMA3FQ13275 785 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 RBBP7Q16576 425 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 FAM84BQ96KN1 310 aaPredicted RBP11.59□□□□□ -0.55
CLIP1-203ENST00000361654 PRMT7Q9NVM4 692 aaPredicted RBP11.59□□□□□ -0.55
CLIP1-203ENST00000361654 EYA4O95677 639 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 SYF2O95926 243 aaKnown RBP11.59□□□□□ -0.55
CLIP1-203ENST00000361654 EGFRP00533 1210 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 PSMA3P25788 255 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 CHRNA3P32297 505 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 ATXN3P54252 364 aaPredicted RBP11.59□□□□□ -0.55
CLIP1-203ENST00000361654 PRR5LQ6MZQ0 368 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 TBC1D1Q86TI0 1168 aaPredicted RBP11.59□□□□□ -0.55
CLIP1-203ENST00000361654 MAML1Q92585 1016 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 SAAL1Q96ER3 474 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 ISCA1Q9BUE6 129 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 INTS2Q9H0H0 1204 aaKnown RBP11.59□□□□□ -0.55
CLIP1-203ENST00000361654 VCPKMTQ9H867 229 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 PARVAQ9NVD7 372 aa11.59□□□□□ -0.55
CLIP1-203ENST00000361654 GPR182O15218 404 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 LUC7L3O95232 432 aaKnown RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 ESRRAP11474 423 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 DEUP1Q05D60 604 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 MED21Q13503 144 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 RHOT1Q8IXI2 618 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 KIRREL3Q8IZU9 778 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 MRPS31Q92665 395 aaKnown RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 YME1L1Q96TA2 773 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 DNAJC7Q99615 494 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 DEFB129Q9H1M3 183 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 ADARB2Q9NS39 739 aaKnown RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 LRRIQ3A6PVS8 624 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 PSMD14O00487 310 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 APOL1O14791 398 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 ZW10O43264 779 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 FGGP02679 453 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 ACADSBP45954 432 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 AARSP49588 968 aaKnown RBP eCLIP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 TDRD10Q5VZ19 366 aaKnown RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 PLEKHH3Q7Z736 793 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 TAGAPQ8N103 731 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 ENAHQ8N8S7 591 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 MAN1C1Q9NR34 630 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 DAGLAQ9Y4D2 1042 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 CFAP65Q6ZU64 1925 aaKnown RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 HMBSP08397 361 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 IRF1P10914 325 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 SCP2P22307 547 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 PNPLA4P41247 253 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 ACTR2P61160 394 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 TERF2Q15554 542 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 C9orf131Q5VYM1 1079 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 NOTUMQ6P988 496 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 RASSF3Q86WH2 238 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 TDRD7Q8NHU6 1098 aaKnown RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 SKA1Q96BD8 255 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 GBA2Q9HCG7 927 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 MAP3K4Q9Y6R4 1608 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 NDUFA10O95299 355 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 CLTAP09496 248 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 CDH6P55285 790 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 TRIM68Q6AZZ1 485 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 ATPAF2Q8N5M1 289 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 ZNF564Q8TBZ8 553 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 NAF1Q96HR8 494 aaKnown RBP11.58□□□□□ -0.56
CLIP1-203ENST00000361654 PSD3Q9NYI0 1048 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 CAPN7Q9Y6W3 813 aa11.58□□□□□ -0.56
CLIP1-203ENST00000361654 POTEFA5A3E0 1075 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 C5orf58C9J3I9 102 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 HMGB3O15347 200 aaKnown RBP11.57□□□□□ -0.56
CLIP1-203ENST00000361654 POTEIP0CG38 1075 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 POTEGQ6S5H5 508 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 POTEEQ6S8J3 1075 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 MMS22LQ6ZRQ5 1243 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 GLYCTKQ8IVS8 523 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 WDR91A4D1P6 747 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 URODP06132 367 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 GNL1P36915 607 aaPredicted RBP11.57□□□□□ -0.56
CLIP1-203ENST00000361654 SPARCL1Q14515 664 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 KRT72Q14CN4 511 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 DPCR1Q3MIW9 517 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 PPP1R13BQ96KQ4 1090 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 HEMGNQ9BXL5 484 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 CATSPERBQ9H7T0 1116 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 TARSL2A2RTX5 802 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms