RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PDE4DIPQ5VU43 2346 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 MEFVO15553 781 aaPredicted RBP16.2■□□□□ 0.18
CCNE1-202ENST00000357943 EXTL3O43909 919 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 EXOC3O60645 756 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 RECQL4O94761 1208 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 UPP2O95045 317 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 EOMESO95936 686 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 KCNJ6P48051 423 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 CASP4P49662 377 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 FKBP3Q00688 224 aaKnown RBP16.2■□□□□ 0.18
CCNE1-202ENST00000357943 SHHQ15465 462 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 CT47A1Q5JQC4 288 aaPredicted RBP16.2■□□□□ 0.18
CCNE1-202ENST00000357943 CBWD2Q8IUF1 395 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 GPD1LQ8N335 351 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 TOP1MTQ969P6 601 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 UBE2OQ9C0C9 1292 aaKnown RBP16.2■□□□□ 0.18
CCNE1-202ENST00000357943 ELAC1Q9H777 363 aaKnown RBP16.2■□□□□ 0.18
CCNE1-202ENST00000357943 TMEM161AQ9NX61 479 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 PCDHB7Q9Y5E2 793 aa16.2■□□□□ 0.18
CCNE1-202ENST00000357943 KIAA0391O15091 583 aaKnown RBP16.19■□□□□ 0.18
CCNE1-202ENST00000357943 AKAP3O75969 853 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 LDHAP00338 332 aaKnown RBP16.19■□□□□ 0.18
CCNE1-202ENST00000357943 AMHP03971 560 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 CXCL8P10145 99 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 FGFR1P11362 822 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 ITGA4P13612 1032 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 MYBPC2Q14324 1141 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 RASIP1Q5U651 963 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 CEP135Q66GS9 1140 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 FOXR2Q6PJQ5 311 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 LRSAM1Q6UWE0 723 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 LRRC55Q6ZSA7 311 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 ZC3H3Q8IXZ2 948 aaKnown RBP16.19■□□□□ 0.18
CCNE1-202ENST00000357943 FBXL18Q96ME1 805 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 ACAP3Q96P50 834 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 CCDC94Q9BW85 323 aaPredicted RBP16.19■□□□□ 0.18
CCNE1-202ENST00000357943 CXCL16Q9H2A7 254 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 RNF19AQ9NV58 838 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 KLK14Q9P0G3 267 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 PARP2Q9UGN5 583 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 CLTAP09496 248 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 RPL13P26373 211 aaKnown RBP16.19■□□□□ 0.18
CCNE1-202ENST00000357943 AFF1P51825 1210 aaKnown RBP16.19■□□□□ 0.18
CCNE1-202ENST00000357943 ZNF445P59923 1031 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 ENOX2Q16206 610 aaKnown RBP16.19■□□□□ 0.18
CCNE1-202ENST00000357943 SNRNP35Q16560 246 aaKnown RBP16.19■□□□□ 0.18
CCNE1-202ENST00000357943 FAM117BQ6P1L5 589 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 NPAS4Q8IUM7 802 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 HACE1Q8IYU2 909 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 CSGALNACT2Q8N6G5 542 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 PGBD4Q96DM1 585 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 SRRTQ9BXP5 876 aaKnown RBP16.19■□□□□ 0.18
CCNE1-202ENST00000357943 LRFN2Q9ULH4 789 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 SLC4A7Q9Y6M7 1214 aa16.19■□□□□ 0.18
CCNE1-202ENST00000357943 TTC3P53804 2025 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 CETN3O15182 167 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 ADRB2P07550 413 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 MLH1P40692 756 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 ZNF165P49910 485 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 GATMP50440 423 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 WNT7BP56706 349 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 SLC10A6Q3KNW5 377 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 CLLU1OSQ5K130 101 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 ENOX1Q8TC92 643 aaKnown RBP16.18■□□□□ 0.18
CCNE1-202ENST00000357943 RNPC3Q96LT9 517 aaKnown RBP16.18■□□□□ 0.18
CCNE1-202ENST00000357943 ZFP42Q96MM3 310 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 NAT10Q9H0A0 1025 aaKnown RBP16.18■□□□□ 0.18
CCNE1-202ENST00000357943 MTIF3Q9H2K0 278 aaKnown RBP16.18■□□□□ 0.18
CCNE1-202ENST00000357943 RPF1Q9H9Y2 349 aaKnown RBP16.18■□□□□ 0.18
CCNE1-202ENST00000357943 RSAD1Q9HA92 442 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 KIAA1586Q9HCI6 787 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 RBAKQ9NYW8 714 aaPredicted RBP16.18■□□□□ 0.18
CCNE1-202ENST00000357943 FRMD4BQ9Y2L6 1034 aa16.18■□□□□ 0.18
CCNE1-202ENST00000357943 ZNF233A6NK53 670 aa16.17■□□□□ 0.18
CCNE1-202ENST00000357943 YARSP54577 528 aaKnown RBP16.17■□□□□ 0.18
CCNE1-202ENST00000357943 KYAT1Q16773 422 aa16.17■□□□□ 0.18
CCNE1-202ENST00000357943 ALKAL1Q6UXT8 129 aa16.17■□□□□ 0.18
CCNE1-202ENST00000357943 GSTCDQ8NEC7 633 aa16.17■□□□□ 0.18
CCNE1-202ENST00000357943 HELQQ8TDG4 1101 aa16.17■□□□□ 0.18
CCNE1-202ENST00000357943 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
CCNE1-202ENST00000357943 GAD1Q99259 594 aa16.17■□□□□ 0.18
CCNE1-202ENST00000357943 GIT1Q9Y2X7 761 aa16.17■□□□□ 0.18
CCNE1-202ENST00000357943 TTC26A0AVF1 554 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 ARL5CA6NH57 179 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 TULP1O00294 542 aaPredicted RBP16.16■□□□□ 0.18
CCNE1-202ENST00000357943 OFD1O75665 1012 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 DGKIO75912 1065 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 BMP8BP34820 402 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 NCAPHQ15003 741 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 TPD52L1Q16890 204 aaPredicted RBP16.16■□□□□ 0.18
CCNE1-202ENST00000357943 SPATA1Q5VX52 437 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 BRSK2Q8IWQ3 736 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 AOPEPQ8N6M6 819 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 SNX27Q96L92 541 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 BPIFA3Q9BQP9 254 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 UBN1Q9NPG3 1134 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 TOPORSQ9NS56 1045 aaPredicted RBP16.16■□□□□ 0.18
CCNE1-202ENST00000357943 MIOSQ9NXC5 875 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 INPP5FQ9Y2H2 1132 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms