RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 LRRC45Q96CN5 670 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 PCYT2Q99447 389 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 GPR20Q99678 358 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 APBA2Q99767 749 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 FGFBP2Q9BYJ0 223 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 A0A087X0T9 212 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 H0YHG0 523 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 GNA14O95837 355 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 FAM228BP0C875 321 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 ATP4AP20648 1035 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 RARRES1P49788 294 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 TRIM32Q13049 653 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 COASYQ13057 564 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 KIF22Q14807 665 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 CCDC40Q4G0X9 1142 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 HERC4Q5GLZ8 1057 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 WLSQ5T9L3 541 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 TAX1BP1Q86VP1 789 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 C4orf19Q8IY42 314 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 ATP6V0A1Q93050 837 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 GANQ9H2C0 597 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 KLC4Q9NSK0 619 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 LOXHD1Q8IVV2 1947 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 GMNCA6NCL1 334 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 HOXC6P09630 235 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 ELNP15502 786 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 STAT5BP51692 787 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 SOX10P56693 466 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 TNFAIP2Q03169 654 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 ARHGAP1Q07960 439 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 MTERF2Q49AM1 385 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 PREPLQ4J6C6 727 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 LACTB2Q53H82 288 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 PADI6Q6TGC4 694 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 MYOCDQ8IZQ8 938 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 MAGEC3Q8TD91 643 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 PPP1R13LQ8WUF5 828 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 AFG1LQ8WV93 481 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 SEC14L1Q92503 715 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 TRIB2Q92519 343 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 CEP170P1Q96L14 293 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 LSM14BQ9BX40 385 aaKnown RBP13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 NLRC4Q9NPP4 1024 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 E7EVH7 732 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 SLC26A4O43511 780 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 KIF4AO95239 1232 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 ATG7O95352 703 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 MYZAPP0CAP1 466 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 ZNF844Q08AG5 666 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 DPY19L2P1Q6NXN4 242 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 C1orf186Q6ZWK4 172 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 LRRC57Q8N9N7 239 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 RDM1Q8NG50 284 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 SLC40A1Q9NP59 571 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 GPRC5CQ9NQ84 441 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 NENFQ9UMX5 172 aa13.67□□□□□ -0.22
RTFDC1-202ENST00000357348 GOLGA6L10A6NI86 522 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 GPR25O00155 361 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 GH1P01241 217 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 ZNF286BP0CG31 522 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 CNGA1P29973 690 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 POLR2FP61218 127 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 IFT88Q13099 833 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 KIAA0753Q2KHM9 967 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 OLFML2BQ68BL8 750 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 MAATS1Q7Z4T9 603 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 RASGEF1CQ8N431 466 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 AZI2Q9H6S1 392 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 DDX20Q9UHI6 824 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 MAFBQ9Y5Q3 323 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 ARID2Q68CP9 1835 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 IGSF9BQ9UPX0 1349 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 ZNF865P0CJ78 1059 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 MUTP22033 750 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 ANXA13P27216 316 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 MTMR3Q13615 1198 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 BYSLQ13895 437 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 RPS6KA1Q15418 735 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 SPDYCQ5MJ68 293 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 FAM26FQ5R3K3 315 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 RNF187Q5TA31 235 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 SFR1Q86XK3 245 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 CCDC65Q8IXS2 484 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 OR6J1Q8NGC5 347 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 TAF4BQ92750 862 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 P3H4Q92791 437 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 PACSIN1Q9BY11 444 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 PACSIN2Q9UNF0 486 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 PCDHA2Q9Y5H9 948 aa13.66□□□□□ -0.22
RTFDC1-202ENST00000357348 CCDC188H7C350 402 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 HIP1RO75146 1068 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 TBCAO75347 108 aaKnown RBP13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 FAM13AO94988 1023 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 STBD1O95210 358 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 CCDC172P0C7W6 258 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 KLHL30Q0D2K2 578 aa13.65□□□□□ -0.22
RTFDC1-202ENST00000357348 DUSP28Q4G0W2 176 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms