RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 LPPQ93052 612 aa16.95■□□□□ 0.3
TRIM13-201ENST00000356017 HSPBP1Q9NZL4 362 aa16.95■□□□□ 0.3
TRIM13-201ENST00000356017 KANSL3Q9P2N6 904 aa16.95■□□□□ 0.3
TRIM13-201ENST00000356017 BICDL2A1A5D9 508 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 EXTL3O43909 919 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 FAM189A1O60320 539 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 RECQL4O94761 1208 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 OSTNP61366 133 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 CT47A1Q5JQC4 288 aaPredicted RBP16.94■□□□□ 0.3
TRIM13-201ENST00000356017 FOXR2Q6PJQ5 311 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 TMCO2Q7Z6W1 182 aaPredicted RBP16.94■□□□□ 0.3
TRIM13-201ENST00000356017 SLC9A9Q8IVB4 645 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 GPD1LQ8N335 351 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 XXYLT1Q8NBI6 393 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 URGCPQ8TCY9 931 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 P2RX5Q93086 422 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 ZNF689Q96CS4 500 aaPredicted RBP16.94■□□□□ 0.3
TRIM13-201ENST00000356017 MRPL9Q9BYD2 267 aaKnown RBP16.94■□□□□ 0.3
TRIM13-201ENST00000356017 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 SEMA6BQ9H3T3 888 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 PCIF1Q9H4Z3 704 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 RPF1Q9H9Y2 349 aaKnown RBP16.94■□□□□ 0.3
TRIM13-201ENST00000356017 PLEKHA5Q9HAU0 1116 aa16.94■□□□□ 0.3
TRIM13-201ENST00000356017 CPSF3Q9UKF6 684 aaKnown RBP16.94■□□□□ 0.3
TRIM13-201ENST00000356017 ARL5CA6NH57 179 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 CLIC2O15247 247 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 OFD1O75665 1012 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 NR3C1P04150 777 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 CD44P16070 742 aaKnown RBP16.93■□□□□ 0.3
TRIM13-201ENST00000356017 CCNE1P24864 410 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 LRIT3Q3SXY7 679 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 ZCWPW2Q504Y3 356 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 CLLU1OSQ5K130 101 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 KLHL10Q6JEL2 608 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 CMTR2Q8IYT2 770 aaKnown RBP16.93■□□□□ 0.3
TRIM13-201ENST00000356017 HELQQ8TDG4 1101 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 RPS6KC1Q96S38 1066 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 FAM213AQ9BRX8 229 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 PCDHA11Q9Y5I1 949 aa16.93■□□□□ 0.3
TRIM13-201ENST00000356017 TBKBP1A7MCY6 615 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 MEIS3P2A8K0S8 358 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 INPPL1O15357 1258 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 MLH1P40692 756 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 ACOT2P49753 483 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 CYP2J2P51589 502 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 PAK1Q13153 545 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 RAB30Q15771 203 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 SEZ6Q53EL9 994 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 NOMO2Q5JPE7 1267 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 CD302Q8IX05 232 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 NELFBQ8WX92 580 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 SAAL1Q96ER3 474 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 FBXL18Q96ME1 805 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 CASD1Q96PB1 797 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 TSPAN18Q96SJ8 248 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 GAD1Q99259 594 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 RC3H2Q9HBD1 1191 aaKnown RBP16.92■□□□□ 0.3
TRIM13-201ENST00000356017 RNF19AQ9NV58 838 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 ANO10Q9NW15 660 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 DMAC2Q9NW81 257 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 ZNF233A6NK53 670 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 EXOC3O60645 756 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 NR2F2P24468 414 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 TNFSF9P41273 254 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 SMAD3P84022 425 aaKnown RBP16.92■□□□□ 0.3
TRIM13-201ENST00000356017 FKBP3Q00688 224 aaKnown RBP16.92■□□□□ 0.3
TRIM13-201ENST00000356017 ADAM9Q13443 819 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 BTG3Q14201 252 aaPredicted RBP16.92■□□□□ 0.3
TRIM13-201ENST00000356017 STX1AQ16623 288 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 DPCR1Q3MIW9 517 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 ANKRD40Q6AI12 368 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 FAM109BQ6ICB4 259 aaPredicted RBP16.92■□□□□ 0.3
TRIM13-201ENST00000356017 ALKAL1Q6UXT8 129 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 TMEM192Q8IY95 271 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 RWDD2AQ9UIY3 292 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 MSRAQ9UJ68 235 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 INPP5FQ9Y2H2 1132 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 FRMD4BQ9Y2L6 1034 aa16.92■□□□□ 0.3
TRIM13-201ENST00000356017 GRXCR1A8MXD5 290 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 ERCC5P28715 1186 aaPredicted RBP16.91■□□□□ 0.3
TRIM13-201ENST00000356017 RABGGTBP53611 331 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 PPP2R3AQ06190 1150 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 SNRNP35Q16560 246 aaKnown RBP16.91■□□□□ 0.3
TRIM13-201ENST00000356017 SLC10A6Q3KNW5 377 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 XKR4Q5GH76 650 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 ZBTB41Q5SVQ8 909 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 CRELD2Q6UXH1 353 aaPredicted RBP16.91■□□□□ 0.3
TRIM13-201ENST00000356017 LRRC43Q8N309 656 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
TRIM13-201ENST00000356017 NOC3LQ8WTT2 800 aaKnown RBP16.91■□□□□ 0.3
TRIM13-201ENST00000356017 SNX27Q96L92 541 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 ZFP42Q96MM3 310 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 ASB7Q9H672 318 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 KLK14Q9P0G3 267 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 CNTN3Q9P232 1028 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 CTNND2Q9UQB3 1225 aa16.91■□□□□ 0.3
TRIM13-201ENST00000356017 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.91■□□□□ 0.3
TRIM13-201ENST00000356017 TTC26A0AVF1 554 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 GOLGA8IPA6NC78 632 aa16.9■□□□□ 0.3
TRIM13-201ENST00000356017 GOLGA8JA6NMD2 632 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms