RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 RTL3Q8N8U3 475 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 MYCBPQ99417 103 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 BCL2L12Q9HB09 334 aa12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 KIF14Q15058 1648 aa12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 XDHP47989 1333 aa12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 SEMA3EO15041 775 aa12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 CASP14P31944 242 aa12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 NUGGCQ68CJ6 796 aa12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 SLC44A2Q8IWA5 706 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 REXO5Q96IC2 774 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 PRRG4Q9BZD6 226 aa12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 NMRK1Q9NWW6 199 aa12.13□□□□□ -0.47
NUDCD3-202ENST00000355451 NOS3P29474 1203 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 AP1S2P56377 157 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 PSMC6P62333 389 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 CSNK2BP67870 215 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 WRNIP1Q96S55 665 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 IMPAD1Q9NX62 359 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 PKD2L2Q9NZM6 624 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 SH3GLB1Q9Y371 365 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 ADGRL1O94910 1474 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 NDUFS2O75306 463 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 PGBD4Q96DM1 585 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 FAR2Q96K12 515 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 ZNF804BA4D1E1 1349 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 PRODHO43272 600 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 COPB2P35606 906 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 PRIM2P49643 509 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 KCNB1Q14721 858 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 MARK2Q7KZI7 788 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 RELL1Q8IUW5 271 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 MARK1Q9P0L2 795 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 FGD5Q6ZNL6 1462 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 CTNND1O60716 968 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 DEAF1O75398 565 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 PGK2P07205 417 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 SLC16A2P36021 539 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 EIF4A1P60842 406 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 CTTNQ14247 550 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 IPCEF1Q8WWN9 437 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 PLEKHA5Q9HAU0 1116 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 ANKRD12Q6UB98 2062 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 PACS1Q6VY07 963 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 CCDC177Q9NQR7 707 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 NRBP1Q9UHY1 535 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 ITIH6Q6UXX5 1313 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 ARF4P18085 180 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 PRKAA1Q13131 559 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 PEG10Q86TG7 708 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 APOBEC3FQ8IUX4 373 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 ATP11CQ8NB49 1132 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 HSPBP1Q9NZL4 362 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 SOS1Q07889 1333 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 COPB1P53618 953 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 SCAIQ8N9R8 606 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 LRRC39Q96DD0 335 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 KIF12Q96FN5 646 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 OTUD5Q96G74 571 aa12.12□□□□□ -0.47
NUDCD3-202ENST00000355451 E9PBE3 544 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 DDI1Q8WTU0 396 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 ARMC7Q9H6L4 198 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 KANSL2Q9H9L4 492 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 M0QYV0 167 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 ATP9BO43861 1147 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 HDLBPQ00341 1268 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 MMRN1Q13201 1228 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 ZNF713Q8N859 430 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 SHCBP1Q8NEM2 672 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 WDR60Q8WVS4 1066 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 PI4KBQ9UBF8 816 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 PCDH8O95206 1070 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 PBLDP30039 288 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 PDX1P52945 283 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 CYP24A1Q07973 514 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 PDIA6Q15084 440 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 PRPF18Q99633 342 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 FAM96AQ9H5X1 160 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 ZFYVE28Q9HCC9 887 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 PIN4Q9Y237 131 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 BMP10O95393 424 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 SDC4P31431 198 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 OR1G1P47890 313 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 TPI1P60174 286 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 TGM3Q08188 693 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 MAPRE2Q15555 327 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 THOC1Q96FV9 657 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 PIGUQ9H490 435 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 PIK3CDO00329 1044 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 SCGNO76038 276 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 KRT6AP02538 564 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 KRT6BP04259 564 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 KRT6CP48668 564 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 CSTF3Q12996 717 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 CDH18Q13634 790 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 PREPLQ4J6C6 727 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-202ENST00000355451 FAM45BPQ6NSW5 357 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms