RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 C17orf50Q8WW18 174 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 CFAP99D6REC4 459 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 RPL19P84098 196 aaKnown RBP8.45□□□□□ -1.06
HTT-201ENST00000355072 ZNF544Q6NX49 715 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 LMBR1LQ6UX01 489 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 MYH14Q7Z406 1995 aaKnown RBP8.45□□□□□ -1.06
HTT-201ENST00000355072 MBD4O95243 580 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 MAPK1P28482 360 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 ALDH1B1P30837 517 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 EIF4A3P38919 411 aaKnown RBP8.45□□□□□ -1.06
HTT-201ENST00000355072 CTCFP49711 727 aaPredicted RBP8.45□□□□□ -1.06
HTT-201ENST00000355072 BICRAQ9NZM4 1560 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 CD19P15391 556 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 PTPN4P29074 926 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 FCHO2Q0JRZ9 810 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 CEP78Q5JTW2 689 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 AS3MTQ9HBK9 375 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 CORO2BQ9UQ03 480 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 EMILIN1Q9Y6C2 1016 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 KIF13AQ9H1H9 1805 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 SOWAHDA6NJG2 315 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 PER1O15534 1290 aaPredicted RBP8.45□□□□□ -1.06
HTT-201ENST00000355072 WASHC5Q12768 1159 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 CTTNQ14247 550 aaKnown RBP8.45□□□□□ -1.06
HTT-201ENST00000355072 CCDC137Q6PK04 289 aaKnown RBP8.45□□□□□ -1.06
HTT-201ENST00000355072 ACAP3Q96P50 834 aa8.45□□□□□ -1.06
HTT-201ENST00000355072 PPARGC1AQ9UBK2 798 aaKnown RBP8.45□□□□□ -1.06
HTT-201ENST00000355072 KRT1P04264 644 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 NPR3P17342 541 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 GRIK1P39086 918 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 FAM92BQ6ZTR7 304 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 FRMD5Q7Z6J6 570 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 RPRD1BQ9NQG5 326 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 FAM153AQ9UHL3 310 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 CNOT7Q9UIV1 285 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 NOVA2Q9UNW9 492 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 MTMR6Q9Y217 621 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 IL12AP29459 219 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 CASP2P42575 452 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 ACTN3Q08043 901 aaPredicted RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 MAD2L1Q13257 205 aaPredicted RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 TSGA10IPQ3SY00 556 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 ZWILCHQ9H900 591 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 WHRNQ9P202 907 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 NCOA3Q9Y6Q9 1424 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 DMC1Q14565 340 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 CENPTQ96BT3 561 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 DHX36Q9H2U1 1008 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 STON1Q9Y6Q2 735 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 RPLP2P05387 115 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 RUNDC3AQ59EK9 446 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 BBS7Q8IWZ6 715 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 ZCRB1Q8TBF4 217 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 SEC16BQ96JE7 1060 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 ELAC2Q9BQ52 826 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 POLBP06746 335 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 VCAM1P19320 739 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 DLG4P78352 724 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 CCDC153Q494R4 210 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 PDCD6IPQ8WUM4 868 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 ZBED2Q9BTP6 218 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 VTI1BQ9UEU0 232 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 EIF2B5Q13144 721 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 CDKL3Q8IVW4 592 aaPredicted RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 SKA1Q96BD8 255 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 NEDD4LQ96PU5 975 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 ASB2Q96Q27 587 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 CCNB1IP1Q9NPC3 277 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 SLIT1O75093 1534 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 NCKAP5LQ9HCH0 1330 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 SNX2O60749 519 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 VIL1P09327 827 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 SCRN3Q0VDG4 424 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 TTC39BQ5VTQ0 682 aaPredicted RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 PDZK1P1A8MUH7 402 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 DYNC1LI2O43237 492 aaPredicted RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 LRRC36Q1X8D7 754 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 WASHC2DQ5SRD0 308 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 FAM167AQ96KS9 214 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 ZC3H12CQ9C0D7 883 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 RMI1Q9H9A7 625 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 SH3GLB1Q9Y371 365 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 PHF2O75151 1096 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 TTLL1O95922 423 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 MUTP22033 750 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 SMARCAD1Q9H4L7 1026 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 TMCO1Q9UM00 188 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 ARIH1Q9Y4X5 557 aaPredicted RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 OVOS2A0A0G2JMS6 1433 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 GSAPA4D1B5 854 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 TSPAN9O75954 239 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 PDIA3P30101 505 aaKnown RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 POLGP54098 1239 aaPredicted RBP8.44□□□□□ -1.06
HTT-201ENST00000355072 MAPK11Q15759 364 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 SLC18A3Q16572 532 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 MDH1BQ5I0G3 518 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 NAA35Q5VZE5 725 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 BICRALQ6AI39 1079 aa8.44□□□□□ -1.06
HTT-201ENST00000355072 ZNF790Q6PG37 636 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms