RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ORC1Q13415 861 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 CCDC142Q17RM4 750 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 PLEKHM3Q6ZWE6 761 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 CLEC10AQ8IUN9 316 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 MICALL2Q8IY33 904 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 KIAA2013Q8IYS2 634 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 MB21D1Q8N884 522 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 ASZ1Q8WWH4 475 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 SHCBP1LQ9BZQ2 653 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 RWDD2AQ9UIY3 292 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 MCM8Q9UJA3 840 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 PARD3Q8TEW0 1356 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 KCNQ2O43526 872 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 ARID5BQ14865 1188 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 APOBEC3FQ8IUX4 373 aaKnown RBP10.56□□□□□ -0.72
COL11A1-201ENST00000353414 UBA3Q8TBC4 463 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 PHF21AQ96BD5 680 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 NR3C1P04150 777 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 ARHGEF7Q14155 803 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 ZNF564Q8TBZ8 553 aaPredicted RBP10.56□□□□□ -0.72
COL11A1-201ENST00000353414 PBKQ96KB5 322 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 PLEKHA5Q9HAU0 1116 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 ANGPTL2Q9UKU9 493 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 DGKIO75912 1065 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 LDHAP00338 332 aaKnown RBP10.56□□□□□ -0.72
COL11A1-201ENST00000353414 PCYT1AP49585 367 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 DEFB128Q7Z7B8 93 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 SLC9A2Q9UBY0 812 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 ZFP69BQ9UJL9 534 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 DTNAQ9Y4J8 743 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 IKBKBO14920 756 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 PPP6R2O75170 966 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 LMNAP02545 664 aaKnown RBP10.56□□□□□ -0.72
COL11A1-201ENST00000353414 FTLP02792 175 aaPredicted RBP10.56□□□□□ -0.72
COL11A1-201ENST00000353414 CARSP49589 748 aaKnown RBP10.56□□□□□ -0.72
COL11A1-201ENST00000353414 TOMM20Q15388 145 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 SPIRE2Q8WWL2 714 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 ABI2Q9NYB9 513 aaPredicted RBP10.56□□□□□ -0.72
COL11A1-201ENST00000353414 CD274Q9NZQ7 290 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 SNX5Q9Y5X3 404 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 CLTCQ00610 1675 aaKnown RBP10.56□□□□□ -0.72
COL11A1-201ENST00000353414 TMEM2Q9UHN6 1383 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 ARHGEF9O43307 516 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 GRIN3BO60391 1043 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 ARL4CP56559 192 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 GIMAP8Q8ND71 665 aaPredicted RBP10.56□□□□□ -0.72
COL11A1-201ENST00000353414 CENPKQ9BS16 269 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 YIPF3Q9GZM5 350 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 LATS2Q9NRM7 1088 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 TRIM60Q495X7 471 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 ZRANB3Q5FWF4 1079 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 RD3Q7Z3Z2 195 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 ILDR1Q86SU0 546 aaPredicted RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 LRRC71Q8N4P6 559 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 SCG3Q8WXD2 468 aaKnown RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 RRP15Q9Y3B9 282 aaKnown RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 FGFR4P22455 802 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 EPHB4P54760 987 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 CUL3Q13618 768 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 DEPDC1Q5TB30 811 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 ALKBH5Q6P6C2 394 aaKnown RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 DEFB132Q7Z7B7 95 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 CDR2LQ86X02 465 aaPredicted RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 NSUN6Q8TEA1 469 aaKnown RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 ACSF2Q96CM8 615 aaPredicted RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 KDM4CQ9H3R0 1056 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 DDX28Q9NUL7 540 aaKnown RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 CNOT7Q9UIV1 285 aaKnown RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 AGAP1Q9UPQ3 857 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 SNX9Q9Y5X1 595 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 NCF1BA6NI72 391 aaPredicted RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 TTLL13PA6NNM8 815 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 NCF1CA8MVU1 366 aaPredicted RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 APOL1O14791 398 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 MMEP08473 750 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 NCF1P14598 390 aaPredicted RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 CYTH1Q15438 398 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 FAM167BQ9BTA0 163 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 CYTH3O43739 400 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 NDUFA10O95299 355 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 ATP1A3P13637 1013 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 SLC9A1P19634 815 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 COASYQ13057 564 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 SLC39A14Q15043 492 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 SMTNL2Q2TAL5 461 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 RBM41Q96IZ5 413 aaKnown RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 EIF2AK1Q9BQI3 630 aaKnown RBP10.55□□□□□ -0.72
COL11A1-201ENST00000353414 MAGEB5Q9BZ81 275 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 CDC23Q9UJX2 597 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 INSRP06213 1382 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 ZBTB5O15062 677 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 RAD51Q06609 339 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 TXLNGQ9NUQ3 528 aa10.55□□□□□ -0.72
COL11A1-201ENST00000353414 ESYT3A0FGR9 886 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 TCF3P15923 654 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 ZNF445P59923 1031 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 TRIM32Q13049 653 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 NAALADL2Q58DX5 795 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms