RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CAMKK2Q96RR4 588 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 TUT1Q9H6E5 874 aaKnown RBP14.6□□□□□ -0.07
SMC6-201ENST00000351948 STRIP2Q9ULQ0 834 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 PHLPP1O60346 1717 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 GYPCP04921 128 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 YY1P25490 414 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 SYCP2LQ5T4T6 812 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 VPS52Q8N1B4 723 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 OSMRQ99650 979 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 KCNF1Q9H3M0 494 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 KBTBD4Q9NVX7 518 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 NRXN3Q9Y4C0 1643 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 A0A087X0B3 334 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 EIF3CLB5ME19 914 aaKnown RBP14.59□□□□□ -0.07
SMC6-201ENST00000351948 C2CD2LO14523 706 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 ERVK-9P63128 1117 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 ERVK-24P63145 666 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 PPATQ06203 517 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 TMED2Q15363 201 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 UBA3Q8TBC4 463 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 PDLIM2Q96JY6 352 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 EIF3CQ99613 913 aaKnown RBP14.59□□□□□ -0.07
SMC6-201ENST00000351948 A0A087WZ62 844 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 ASAP2O43150 1006 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 Q4G0T1 1027 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 C1orf54Q8WWF1 131 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 FDXACB1Q9BRP7 624 aaPredicted RBP14.59□□□□□ -0.07
SMC6-201ENST00000351948 STK33Q9BYT3 514 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 TJP3O95049 919 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 ADCYAP1R1P41586 468 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 GALCP54803 685 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 KLHL8Q9P2G9 620 aaPredicted RBP14.59□□□□□ -0.07
SMC6-201ENST00000351948 EIF3DO15371 548 aaKnown RBP eCLIP14.59□□□□□ -0.07
SMC6-201ENST00000351948 HMBSP08397 361 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 INSRRP14616 1297 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 KCNJ6P48051 423 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 ALDH5A1P51649 535 aaPredicted RBP14.59□□□□□ -0.07
SMC6-201ENST00000351948 PRAMEF19Q5SWL8 479 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 MOXD1Q6UVY6 613 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 RAD9BQ6WBX8 426 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 ENOSF1Q7L5Y1 443 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 CDKL2Q92772 493 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 COPS5Q92905 334 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 OSBPL9Q96SU4 736 aa14.59□□□□□ -0.07
SMC6-201ENST00000351948 EXTL3O43909 919 aa14.58□□□□□ -0.07
SMC6-201ENST00000351948 PLEKP08567 350 aaPredicted RBP14.58□□□□□ -0.07
SMC6-201ENST00000351948 GLB1LQ6UWU2 654 aa14.58□□□□□ -0.07
SMC6-201ENST00000351948 METTL7BQ6UX53 244 aa14.58□□□□□ -0.07
SMC6-201ENST00000351948 TNIP3Q96KP6 325 aa14.58□□□□□ -0.07
SMC6-201ENST00000351948 FMO2Q99518 471 aa14.58□□□□□ -0.07
SMC6-201ENST00000351948 SPON2Q9BUD6 331 aa14.58□□□□□ -0.07
SMC6-201ENST00000351948 MTMR12Q9C0I1 747 aa14.58□□□□□ -0.07
SMC6-201ENST00000351948 SEMA6BQ9H3T3 888 aa14.58□□□□□ -0.07
SMC6-201ENST00000351948 PIDD1Q9HB75 910 aa14.58□□□□□ -0.07
SMC6-201ENST00000351948 HOMER3Q9NSC5 361 aa14.58□□□□□ -0.07
SMC6-201ENST00000351948 EPHB4P54760 987 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 SGSM1Q2NKQ1 1148 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 C1orf228Q6PIY5 440 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 KCNK18Q7Z418 384 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 ZC3H18Q86VM9 953 aaKnown RBP14.58□□□□□ -0.08
SMC6-201ENST00000351948 TC2NQ8N9U0 490 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.58□□□□□ -0.08
SMC6-201ENST00000351948 ZNF185O15231 689 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 SRGAP2BP0DMP2 458 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 AP3M2P53677 418 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 CDH6P55285 790 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 NOTUMQ6P988 496 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 RDM1Q8NG50 284 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 FAF2Q96CS3 445 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 ABCB6Q9NP58 842 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 STAP1Q9ULZ2 295 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 RRN3P2A6NIE6 340 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 KRT3P12035 628 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 MMP14P50281 582 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 MNAT1P51948 309 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 ZKSCAN8Q15776 578 aaPredicted RBP14.58□□□□□ -0.08
SMC6-201ENST00000351948 RFFLQ8WZ73 363 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 ANKS1AQ92625 1134 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 RNF19AQ9NV58 838 aa14.58□□□□□ -0.08
SMC6-201ENST00000351948 SLITRK3O94933 977 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 BEX3Q00994 111 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 SEMA3FQ13275 785 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 SKIV2LQ15477 1246 aaKnown RBP14.57□□□□□ -0.08
SMC6-201ENST00000351948 MYLK4Q86YV6 388 aaPredicted RBP14.57□□□□□ -0.08
SMC6-201ENST00000351948 GDAP1Q8TB36 358 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 PPP4R1Q8TF05 950 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 HASPINQ8TF76 798 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 SCFD1Q8WVM8 642 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 C18orf8Q96DM3 657 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 RNF14Q9UBS8 474 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 BRD2P25440 801 aaKnown RBP14.57□□□□□ -0.08
SMC6-201ENST00000351948 PMS1P54277 932 aaKnown RBP14.57□□□□□ -0.08
SMC6-201ENST00000351948 IRX4P78413 519 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 GJC2Q5T442 439 aaPredicted RBP14.57□□□□□ -0.08
SMC6-201ENST00000351948 BTBD8Q5XKL5 378 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 NXNQ6DKJ4 435 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 FAM118BQ9BPY3 351 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 SMARCAL1Q9NZC9 954 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 MIF4GDA9UHW6 222 aaKnown RBP14.57□□□□□ -0.08
SMC6-201ENST00000351948 OTOP1Q7RTM1 612 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms