RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 EDF1O60869 148 aaKnown RBP16.73■□□□□ 0.27
LRP8-202ENST00000347547 MYBL1P10243 752 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 PYGMP11217 842 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 CHKAP35790 457 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 CLK2P49760 499 aaKnown RBP16.73■□□□□ 0.27
LRP8-202ENST00000347547 NR1H3Q13133 447 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 RCN2Q14257 317 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 STAT4Q14765 748 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 NFIL3Q16649 462 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 LRRC23Q53EV4 343 aaPredicted RBP16.73■□□□□ 0.27
LRP8-202ENST00000347547 TMEM63BQ5T3F8 832 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 SNX30Q5VWJ9 437 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 POTEBQ6S5H4 581 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 RELL1Q8IUW5 271 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 SRRM1Q8IYB3 904 aaKnown RBP16.73■□□□□ 0.27
LRP8-202ENST00000347547 SH3RF3Q8TEJ3 882 aaPredicted RBP16.73■□□□□ 0.27
LRP8-202ENST00000347547 SNF8Q96H20 258 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 ZNF287Q9HBT7 754 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 EP400Q96L91 3159 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 CNTNAP4Q9C0A0 1308 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 SNED1Q8TER0 1413 aa16.73■□□□□ 0.27
LRP8-202ENST00000347547 TCRBV7S2A1N4TA0A589 114 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 ATP9AO75110 1047 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 NOVP48745 357 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 CASP4P49662 377 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 CACNA2D1P54289 1103 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 MEX3CQ5U5Q3 659 aaKnown RBP16.72■□□□□ 0.27
LRP8-202ENST00000347547 NEDD1Q8NHV4 660 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 ZNF398Q8TD17 642 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 DENND1AQ8TEH3 1009 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 VAT1LQ9HCJ6 419 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 NINJ2Q9NZG7 142 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 SLC4A7Q9Y6M7 1214 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 FOXO6A8MYZ6 492 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 PRPF4O43172 522 aaKnown RBP eCLIP16.72■□□□□ 0.27
LRP8-202ENST00000347547 PYGLP06737 847 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 CETPP11597 493 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 COMTP21964 271 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 KCNA3P22001 575 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 TNNI2P48788 182 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 KPNB1Q14974 876 aaKnown RBP16.72■□□□□ 0.27
LRP8-202ENST00000347547 KHDC1Q4VXA5 237 aaKnown RBP16.72■□□□□ 0.27
LRP8-202ENST00000347547 FAM182BQ5T319 152 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 BICDL1Q6ZP65 573 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 SFR1Q86XK3 245 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 DNAJC18Q9H819 358 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 MINPP1Q9UNW1 487 aa16.72■□□□□ 0.27
LRP8-202ENST00000347547 A0A1B0GVG6 124 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 THAP12O43422 761 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 SORBS3O60504 671 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 RFX1P22670 979 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 IVDP26440 423 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 PTK6Q13882 451 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 CCDC6Q16204 474 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 KYNUQ16719 465 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 PALB2Q86YC2 1186 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 SCG3Q8WXD2 468 aaKnown RBP16.71■□□□□ 0.27
LRP8-202ENST00000347547 MAML1Q92585 1016 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 NR1H4Q96RI1 486 aaPredicted RBP16.71■□□□□ 0.27
LRP8-202ENST00000347547 AGPAT1Q99943 283 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 CCDC77Q9BR77 488 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 CYLDQ9NQC7 956 aa16.71■□□□□ 0.27
LRP8-202ENST00000347547 TRPC5Q9UL62 973 aaPredicted RBP16.71■□□□□ 0.27
LRP8-202ENST00000347547 C2CD2LO14523 706 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 MARCH6O60337 910 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 MAN1A1P33908 653 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 KCNJ1P48048 391 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 GPC5P78333 572 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 KRT17Q04695 432 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 SLC34A1Q06495 639 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 AP1B1Q10567 949 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 PDK4Q16654 411 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 SPTY2D1Q68D10 685 aaPredicted RBP16.71■□□□□ 0.26
LRP8-202ENST00000347547 ZNF449Q6P9G9 518 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 RNF207Q6ZRF8 634 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 C3orf67Q6ZVT6 689 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 KLHL23Q8NBE8 558 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 SLC44A5Q8NCS7 719 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 NRG4Q8WWG1 115 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 ZHX3Q9H4I2 956 aa16.71■□□□□ 0.26
LRP8-202ENST00000347547 CHCHD3Q9NX63 227 aaKnown RBP16.71■□□□□ 0.26
LRP8-202ENST00000347547 CBX6O95503 412 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 ABHD2P08910 425 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 FMO5P49326 533 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 CDR2Q01850 454 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 DNAJC3Q13217 504 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 SPARCL1Q14515 664 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 LRRC74BQ6ZQY2 392 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 COA7Q96BR5 231 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 MIPEPQ99797 713 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 TUBB6Q9BUF5 446 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 DDX43Q9NXZ2 648 aaKnown RBP16.7■□□□□ 0.26
LRP8-202ENST00000347547 APEX2Q9UBZ4 518 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 SMAPO00193 183 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 FSCN2O14926 492 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 PSMC2P35998 433 aaKnown RBP16.7■□□□□ 0.26
LRP8-202ENST00000347547 CTC1Q2NKJ3 1217 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 CCDC125Q86Z20 511 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms