RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 GPD1LQ8N335 351 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 SYT2Q8N9I0 419 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 LRGUKQ96M69 825 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 DBR1Q9UK59 544 aaKnown RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 ZNF711Q9Y462 761 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 SSU72P8A0A1W2PR75 194 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 CSPG5O95196 566 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 ERFP50548 548 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 EZH2Q15910 746 aaKnown RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 LONRF1Q17RB8 773 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 CCDC92Q53HC0 331 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 CATSPER4Q7RTX7 472 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 B4GALNT2Q8NHY0 566 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 TSPYL2Q9H2G4 693 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 Q9H521 79 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 AGO2Q9UKV8 859 aaKnown RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 DEPDC5O75140 1603 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 GOLGA8RI6L899 631 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 MTM1Q13496 603 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 THOC5Q13769 683 aaKnown RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 EPC2Q52LR7 807 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 PLA2G4FQ68DD2 849 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 RWDD4Q6NW29 188 aaKnown RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 FUKQ8N0W3 1084 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 EXT2Q93063 718 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 STK33Q9BYT3 514 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 TRIM55Q9BYV6 548 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 KLC2Q9H0B6 622 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 RHBDL2Q9NX52 303 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 USP32Q8NFA0 1604 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 PXDNQ92626 1479 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 ATP5HO75947 161 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 CALB1P05937 261 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 SRGAP2BP0DMP2 458 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 KCNA3P22001 575 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 DEUP1Q05D60 604 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 SEMA3FQ13275 785 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 NBPF20Q3BBV1 942 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 KIAA1755Q5JYT7 1200 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 C1orf228Q6PIY5 440 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 RFX8Q6ZV50 586 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 ILDR1Q86SU0 546 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 RHOT1Q8IXI2 618 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 KAT2BQ92831 832 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 TMEM143Q96AN5 459 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 LBHD1Q9BQE6 289 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 RPAP3Q9H6T3 665 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 KIAA1586Q9HCI6 787 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 TUFT1Q9NNX1 390 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 FAM53CQ9NYF3 392 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 ZFP69BQ9UJL9 534 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 GYG2O15488 501 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 RTN2O75298 545 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 KRT37O76014 449 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 ADRA2BP18089 450 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 SFNP31947 248 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 ARSEP51690 589 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 EARS2Q5JPH6 523 aaKnown RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 SLC13A1Q9BZW2 595 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 AP5M1Q9H0R1 490 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 SMYD3Q9H7B4 428 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 SLC9A2Q9UBY0 812 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 DDX20Q9UHI6 824 aaKnown RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 PRR12Q9ULL5 1215 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 SLC16A3O15427 465 aaKnown RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 DCTN3O75935 186 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 SERPINB4P48594 390 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 IL1RL1Q01638 556 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 GRB10Q13322 594 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 TSTA3Q13630 321 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 NAB2Q15742 525 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 NTRK3Q16288 839 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 DNAAF5Q86Y56 855 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 CRLF3Q8IUI8 442 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 EXOC8Q8IYI6 725 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 DNAJC9Q8WXX5 260 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 RAPGEF5Q92565 580 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 TRIM56Q9BRZ2 755 aaKnown RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 FAM217BQ9NTX9 383 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-202ENST00000343090 DIP2BQ9P265 1576 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 THEGQ9P2T0 379 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 C15orf41Q9Y2V0 281 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 L3MBTL1Q9Y468 752 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 SLC4A7Q9Y6M7 1214 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 FAM205AQ6ZU69 1335 aa8.55□□□□□ -1.04
UBE4B-202ENST00000343090 TCP11X1B4DZS4 312 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 NFX1Q12986 1120 aaKnown RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 MTMR2Q13614 643 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 RC3H1Q5TC82 1133 aaKnown RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 ATG16L1Q676U5 607 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 FAM43BQ6ZT52 329 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 CATSPER3Q86XQ3 398 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 MDM1Q8TC05 714 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 ASNSD1Q9NWL6 643 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 IP6K2Q9UHH9 426 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 PCDHA10Q9Y5I2 948 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 MEGF6O75095 1541 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 NQO1P15559 274 aaKnown RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 KCNJ1P48048 391 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 HMGCS2P54868 508 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms