RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 RABGGTAQ92696 567 aa22.17■■□□□ 1.14
SYNE2-201ENST00000341472 FBXL18Q96ME1 805 aa22.17■■□□□ 1.14
SYNE2-201ENST00000341472 RIPOR3Q96MK2 946 aa22.17■■□□□ 1.14
SYNE2-201ENST00000341472 NTPCRQ9BSD7 190 aaKnown RBP22.17■■□□□ 1.14
SYNE2-201ENST00000341472 RAPGEFL1Q9UHV5 662 aa22.17■■□□□ 1.14
SYNE2-201ENST00000341472 TNFSF13BQ9Y275 285 aa22.17■■□□□ 1.14
SYNE2-201ENST00000341472 GDAQ9Y2T3 454 aa22.17■■□□□ 1.14
SYNE2-201ENST00000341472 DSG1Q02413 1049 aa22.16■■□□□ 1.14
SYNE2-201ENST00000341472 KANK3Q6NY19 840 aa22.16■■□□□ 1.14
SYNE2-201ENST00000341472 RNF168Q8IYW5 571 aaPredicted RBP22.16■■□□□ 1.14
SYNE2-201ENST00000341472 CALML4Q96GE6 196 aa22.16■■□□□ 1.14
SYNE2-201ENST00000341472 ACO2Q99798 780 aaKnown RBP22.16■■□□□ 1.14
SYNE2-201ENST00000341472 MRPL4Q9BYD3 311 aaKnown RBP22.16■■□□□ 1.14
SYNE2-201ENST00000341472 GPR62Q9BZJ7 368 aa22.16■■□□□ 1.14
SYNE2-201ENST00000341472 RXFP1Q9HBX9 757 aa22.16■■□□□ 1.14
SYNE2-201ENST00000341472 CHST7Q9NS84 486 aa22.16■■□□□ 1.14
SYNE2-201ENST00000341472 ARHGAP28Q9P2N2 729 aa22.16■■□□□ 1.14
SYNE2-201ENST00000341472 ADAM28Q9UKQ2 775 aa22.16■■□□□ 1.14
SYNE2-201ENST00000341472 PRR33A8MZF0 331 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 PTGESO14684 152 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 SLC16A4O15374 487 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 CLCN4P51793 760 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 SMTNP53814 917 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 SLC12A3P55017 1021 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 RAD51AP2Q09MP3 1159 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 HSP90AA2PQ14568 343 aaPredicted RBP22.15■■□□□ 1.14
SYNE2-201ENST00000341472 SF3A1Q15459 793 aaKnown RBP22.15■■□□□ 1.14
SYNE2-201ENST00000341472 USP41Q3LFD5 358 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 TMEM119Q4V9L6 283 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 FUT10Q6P4F1 479 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 SPIRE2Q8WWL2 714 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 TCHPQ9BT92 498 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 KCND2Q9NZV8 630 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 CDH22Q9UJ99 828 aa22.15■■□□□ 1.14
SYNE2-201ENST00000341472 ATG2AQ2TAZ0 1938 aa22.14■■□□□ 1.14
SYNE2-201ENST00000341472 CASTOR2A6NHX0 329 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 SPDYE4A6NLX3 237 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 TEX28O15482 410 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 ADH1AP07327 375 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 WEE2P0C1S8 567 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 PLS3P13797 630 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 LONP1P36776 959 aaKnown RBP22.14■■□□□ 1.13
SYNE2-201ENST00000341472 TMC5Q6UXY8 1006 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 GPR65Q8IYL9 337 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 EDAQ92838 391 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 INTS4Q96HW7 963 aaKnown RBP22.14■■□□□ 1.13
SYNE2-201ENST00000341472 TARS2Q9BW92 718 aaKnown RBP22.14■■□□□ 1.13
SYNE2-201ENST00000341472 CXCL16Q9H2A7 254 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 PTPRHQ9HD43 1115 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 NR2E1Q9Y466 385 aa22.14■■□□□ 1.13
SYNE2-201ENST00000341472 STRN3Q13033 797 aa22.13■■□□□ 1.13
SYNE2-201ENST00000341472 TAS1R3Q7RTX0 852 aa22.13■■□□□ 1.13
SYNE2-201ENST00000341472 RIN2Q8WYP3 895 aaPredicted RBP22.13■■□□□ 1.13
SYNE2-201ENST00000341472 PAAF1Q9BRP4 392 aa22.13■■□□□ 1.13
SYNE2-201ENST00000341472 CCDC94Q9BW85 323 aaPredicted RBP22.13■■□□□ 1.13
SYNE2-201ENST00000341472 POMKQ9H5K3 350 aa22.13■■□□□ 1.13
SYNE2-201ENST00000341472 SFXN1Q9H9B4 322 aa22.13■■□□□ 1.13
SYNE2-201ENST00000341472 TSHZ2Q9NRE2 1034 aa22.13■■□□□ 1.13
SYNE2-201ENST00000341472 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.13■■□□□ 1.13
SYNE2-201ENST00000341472 CACNG4Q9UBN1 327 aa22.13■■□□□ 1.13
SYNE2-201ENST00000341472 DPP7Q9UHL4 492 aa22.13■■□□□ 1.13
SYNE2-201ENST00000341472 ARID2Q68CP9 1835 aa22.13■■□□□ 1.13
SYNE2-201ENST00000341472 SYT1P21579 422 aa22.12■■□□□ 1.13
SYNE2-201ENST00000341472 GRM5P41594 1212 aa22.12■■□□□ 1.13
SYNE2-201ENST00000341472 YARSP54577 528 aaKnown RBP22.12■■□□□ 1.13
SYNE2-201ENST00000341472 ARSHQ5FYA8 562 aa22.12■■□□□ 1.13
SYNE2-201ENST00000341472 ELMSAN1Q6PJG2 1045 aa22.12■■□□□ 1.13
SYNE2-201ENST00000341472 ZBTB33Q86T24 672 aa22.12■■□□□ 1.13
SYNE2-201ENST00000341472 RASSF8Q8NHQ8 419 aa22.12■■□□□ 1.13
SYNE2-201ENST00000341472 B3GALT6Q96L58 329 aa22.12■■□□□ 1.13
SYNE2-201ENST00000341472 CDT1Q9H211 546 aa22.12■■□□□ 1.13
SYNE2-201ENST00000341472 SF3B1O75533 1304 aaKnown RBP eCLIP22.11■■□□□ 1.13
SYNE2-201ENST00000341472 NPHP3-ACAD11A0A0J9YXS1 232 aa22.11■■□□□ 1.13
SYNE2-201ENST00000341472 GLUD1P00367 558 aa22.11■■□□□ 1.13
SYNE2-201ENST00000341472 MCF2P10911 925 aa22.11■■□□□ 1.13
SYNE2-201ENST00000341472 SP100P23497 879 aaPredicted RBP22.11■■□□□ 1.13
SYNE2-201ENST00000341472 GRIN1Q05586 938 aa22.11■■□□□ 1.13
SYNE2-201ENST00000341472 DHX8Q14562 1220 aaKnown RBP22.11■■□□□ 1.13
SYNE2-201ENST00000341472 NAB2Q15742 525 aa22.11■■□□□ 1.13
SYNE2-201ENST00000341472 ZNF568Q3ZCX4 644 aa22.11■■□□□ 1.13
SYNE2-201ENST00000341472 GPR149Q86SP6 731 aa22.11■■□□□ 1.13
SYNE2-201ENST00000341472 TMEM161BQ8NDZ6 487 aa22.11■■□□□ 1.13
SYNE2-201ENST00000341472 TOPORSQ9NS56 1045 aaPredicted RBP22.11■■□□□ 1.13
SYNE2-201ENST00000341472 FNIP2Q9P278 1114 aa22.11■■□□□ 1.13
SYNE2-201ENST00000341472 LARSQ9P2J5 1176 aaKnown RBP22.11■■□□□ 1.13
SYNE2-201ENST00000341472 CLIC4Q9Y696 253 aa22.11■■□□□ 1.13
SYNE2-201ENST00000341472 C1RP00736 705 aa22.1■■□□□ 1.13
SYNE2-201ENST00000341472 OSTNP61366 133 aa22.1■■□□□ 1.13
SYNE2-201ENST00000341472 ZXDAP98168 799 aa22.1■■□□□ 1.13
SYNE2-201ENST00000341472 FAM171A1Q5VUB5 890 aa22.1■■□□□ 1.13
SYNE2-201ENST00000341472 DCLRE1AQ6PJP8 1040 aa22.1■■□□□ 1.13
SYNE2-201ENST00000341472 GPBP1Q86WP2 473 aa22.1■■□□□ 1.13
SYNE2-201ENST00000341472 PALB2Q86YC2 1186 aa22.1■■□□□ 1.13
SYNE2-201ENST00000341472 HASPINQ8TF76 798 aa22.1■■□□□ 1.13
SYNE2-201ENST00000341472 ACAP3Q96P50 834 aa22.1■■□□□ 1.13
SYNE2-201ENST00000341472 HCN4Q9Y3Q4 1203 aa22.1■■□□□ 1.13
SYNE2-201ENST00000341472 SMIM28A0A1B0GU29 152 aa22.09■■□□□ 1.13
SYNE2-201ENST00000341472 H0YCG3 227 aa22.09■■□□□ 1.13
SYNE2-201ENST00000341472 KIF4AO95239 1232 aa22.09■■□□□ 1.13
SYNE2-201ENST00000341472 BRD1O95696 1058 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms