RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 CDR2LQ86X02 465 aaPredicted RBP18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 ZNF687Q8N1G0 1237 aa18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 LNX1Q8TBB1 728 aaPredicted RBP18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 BICD2Q8TD16 824 aa18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 HASPINQ8TF76 798 aa18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 SLC7A3Q8WY07 619 aa18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 CHAMP1Q96JM3 812 aa18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 CEP170P1Q96L14 293 aa18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 HEBP1Q9NRV9 189 aa18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 DNMT3BQ9UBC3 853 aaKnown RBP18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 GMEB2Q9UKD1 530 aa18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 CNOT1A5YKK6 2376 aaKnown RBP18.26■□□□□ 0.51
NECTIN1-202ENST00000340882 SLC30A4O14863 429 aa18.25■□□□□ 0.51
NECTIN1-202ENST00000340882 NR1I2O75469 434 aa18.25■□□□□ 0.51
NECTIN1-202ENST00000340882 ERLIN2O94905 339 aa18.25■□□□□ 0.51
NECTIN1-202ENST00000340882 HNRNPA1P09651 372 aaKnown RBP eCLIP18.25■□□□□ 0.51
NECTIN1-202ENST00000340882 PFKPQ01813 784 aa18.25■□□□□ 0.51
NECTIN1-202ENST00000340882 AMHR2Q16671 573 aa18.25■□□□□ 0.51
NECTIN1-202ENST00000340882 CSRNP2Q9H175 543 aa18.25■□□□□ 0.51
NECTIN1-202ENST00000340882 GIT1Q9Y2X7 761 aa18.25■□□□□ 0.51
NECTIN1-202ENST00000340882 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 NRG2O14511 850 aaPredicted RBP18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 SLC37A4O43826 429 aa18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 GDF9O60383 454 aa18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 TADA2AO75478 443 aa18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 QARSP47897 775 aaKnown RBP18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 LIN9Q5TKA1 542 aa18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 NOTUMQ6P988 496 aa18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 SLC7A14Q8TBB6 771 aa18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 CXCL16Q9H2A7 254 aa18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 VAV3Q9UKW4 847 aa18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 NID2Q14112 1375 aa18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 TRIP11Q15643 1979 aa18.24■□□□□ 0.51
NECTIN1-202ENST00000340882 CCDC196A0A1B0GTZ2 297 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 B4GALT5O43286 388 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 ARF4P18085 180 aaPredicted RBP18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 PTENP60484 403 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 CREMQ03060 361 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 ADCY1Q08828 1119 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 HSP90AA2PQ14568 343 aaPredicted RBP18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 EMC2Q15006 297 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 PSMD5Q16401 504 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 TSGA10IPQ3SY00 556 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 RNF20Q5VTR2 975 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 FAM171A1Q5VUB5 890 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 Q6ZUG5 572 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 CEP57Q86XR8 500 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 CCDC148Q8NFR7 591 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 NETO1Q8TDF5 533 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 PIK3R5Q8WYR1 880 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 MCRS1Q96EZ8 462 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 NELL2Q99435 816 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 SLC26A6Q9BXS9 759 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 XPNPEP1Q9NQW7 623 aa18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 NDRG2Q9UN36 371 aaKnown RBP18.23■□□□□ 0.51
NECTIN1-202ENST00000340882 PDCD11Q14690 1871 aaKnown RBP18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 M0R2N6 131 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 KIF4AO95239 1232 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 IGFBP6P24592 240 aaPredicted RBP18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 AXLP30530 894 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 HOXA9P31269 272 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 RFC5P40937 340 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 NLRP5P59047 1200 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 MBTD1Q05BQ5 628 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 GRIK3Q13003 919 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 SLC5A9Q2M3M2 681 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 AXDND1Q5T1B0 1012 aaPredicted RBP18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 TANGO2Q6ICL3 276 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 ZNF852Q6ZMS4 543 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 BRF1Q92994 677 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 CCDC51Q96ER9 411 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 TTPALQ9BTX7 342 aa18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 SF3B1O75533 1304 aaKnown RBP eCLIP18.22■□□□□ 0.51
NECTIN1-202ENST00000340882 CASTOR2A6NHX0 329 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 INO80B-WBP1J3KQ70 363 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 NCAM2O15394 837 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 ASAP2O43150 1006 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 NPTXRO95502 500 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 PPP2R5CQ13362 524 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 NPY5RQ15761 445 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 PABPC1LQ4VXU2 614 aaKnown RBP18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 LAIR1Q6GTX8 287 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 ASAP3Q8TDY4 903 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 RNF26Q9BY78 433 aaPredicted RBP18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 FAM126AQ9BYI3 521 aaPredicted RBP18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 CHRDQ9H2X0 955 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 SEMA4GQ9NTN9 838 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 RGL1Q9NZL6 768 aa18.21■□□□□ 0.51
NECTIN1-202ENST00000340882 XYLBO75191 536 aa18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 ECI2O75521 394 aa18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 P4HBP07237 508 aaKnown RBP18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 YWHABP31946 246 aaKnown RBP18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 AKAP17AQ02040 695 aaKnown RBP18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 DMWDQ09019 674 aa18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 SRSF5Q13243 272 aaKnown RBP18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 CAPSQ13938 189 aa18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 PRR23BQ6ZRT6 265 aa18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 IFNLR1Q8IU57 520 aaPredicted RBP18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 TCP11Q8WWU5 503 aa18.2■□□□□ 0.5
NECTIN1-202ENST00000340882 TRIM6Q9C030 488 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms