RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 KRT35Q92764 455 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 TRAIPQ9BWF2 469 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 SIX2Q9NPC8 291 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 LRRC4BQ9NT99 713 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 ZNF148Q9UQR1 794 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 GOLGA8IPA6NC78 632 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 GOLGA8JA6NMD2 632 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 FAM86B1E9PN63 330 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 ATMINO43313 823 aaPredicted RBP10.07□□□□□ -0.8
TRERF1-201ENST00000340840 SNX3O60493 162 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 GH2P01242 217 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 FAM86B2P0C5J1 330 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 NPR1P16066 1061 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 SPARCL1Q14515 664 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 KIF22Q14807 665 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 KYNUQ16719 465 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 KCTD19Q17RG1 926 aaPredicted RBP10.07□□□□□ -0.8
TRERF1-201ENST00000340840 CBWD6Q4V339 395 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 CBWD3Q5JTY5 395 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 CBWD5Q5RIA9 395 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 WDR78Q5VTH9 848 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 HHIPL2Q6UWX4 724 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 MIGA2Q7L4E1 593 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 RNF25Q96BH1 459 aaPredicted RBP10.07□□□□□ -0.8
TRERF1-201ENST00000340840 SYT17Q9BSW7 474 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 IMPG2Q9BZV3 1241 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 TAS2R14Q9NYV8 317 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 WHRNQ9P202 907 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 NR2E1Q9Y466 385 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 TGFB1I1O43294 461 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 DCTN3O75935 186 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 ANP32DO95626 131 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 PPATQ06203 517 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 COG2Q14746 738 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 ZYXQ15942 572 aaKnown RBP10.07□□□□□ -0.8
TRERF1-201ENST00000340840 C6orf163Q5TEZ5 329 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 KIF2BQ8N4N8 673 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 PPFIBP2Q8ND30 876 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 ATL2Q8NHH9 583 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 ERVK-5Q9HDB9 667 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 DDX4Q9NQI0 724 aaKnown RBP10.07□□□□□ -0.8
TRERF1-201ENST00000340840 CHORDC1Q9UHD1 332 aaPredicted RBP10.07□□□□□ -0.8
TRERF1-201ENST00000340840 MEIS2O14770 477 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 ATP2A2P16615 1042 aaKnown RBP10.07□□□□□ -0.8
TRERF1-201ENST00000340840 MUTP22033 750 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 SLC8A3P57103 927 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 AUHQ13825 339 aaKnown RBP10.07□□□□□ -0.8
TRERF1-201ENST00000340840 CNGA2Q16280 664 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 XKR9Q5GH70 373 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 KRT39Q6A163 491 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 STAMBPL1Q96FJ0 436 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 MOV10L1Q9BXT6 1211 aaKnown RBP10.07□□□□□ -0.8
TRERF1-201ENST00000340840 IQCGQ9H095 443 aaKnown RBP10.07□□□□□ -0.8
TRERF1-201ENST00000340840 ABCF3Q9NUQ8 709 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 RAB20Q9NX57 234 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 POLLQ9UGP5 575 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 TOGARAM1Q9Y4F4 1720 aa10.07□□□□□ -0.8
TRERF1-201ENST00000340840 IPO5O00410 1097 aaKnown RBP10.06□□□□□ -0.8
TRERF1-201ENST00000340840 CA4P22748 312 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 POMGNT1Q8WZA1 660 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 SEC14L1Q92503 715 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 STMN2Q93045 179 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 MRPL47Q9HD33 250 aaKnown RBP10.06□□□□□ -0.8
TRERF1-201ENST00000340840 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRERF1-201ENST00000340840 EML1O00423 815 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 PYGMP11217 842 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 VCAM1P19320 739 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 CIITAP33076 1130 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 DMP1Q13316 513 aaPredicted RBP10.06□□□□□ -0.8
TRERF1-201ENST00000340840 MCUR1Q96AQ8 359 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 LRRC37BQ96QE4 947 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 CRAMP1Q96RY5 1269 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 TMEM109Q9BVC6 243 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 ZNF277Q9NRM2 450 aaPredicted RBP10.06□□□□□ -0.8
TRERF1-201ENST00000340840 HSPBP1Q9NZL4 362 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 MGRN1O60291 552 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 IFNB1P01574 187 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 RARAP10276 462 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 PEX19P40855 299 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 PEX3P56589 373 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 AADACL2Q6P093 401 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 CAPN12Q6ZSI9 719 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 SP8Q8IXZ3 490 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 HEMGNQ9BXL5 484 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRERF1-201ENST00000340840 ZDHHC18Q9NUE0 388 aa10.06□□□□□ -0.8
TRERF1-201ENST00000340840 AJAP1Q9UKB5 411 aaPredicted RBP10.06□□□□□ -0.8
TRERF1-201ENST00000340840 IGKV6D-41A0A0C4DH26 115 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 P4HBP07237 508 aaKnown RBP10.05□□□□□ -0.8
TRERF1-201ENST00000340840 ATF7P17544 494 aaPredicted RBP10.05□□□□□ -0.8
TRERF1-201ENST00000340840 ITGA8P53708 1063 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 RNASELQ05823 741 aaKnown RBP10.05□□□□□ -0.8
TRERF1-201ENST00000340840 MUM1Q2TAK8 710 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
TRERF1-201ENST00000340840 IZUMO3Q5VZ72 239 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 C1orf186Q6ZWK4 172 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 HAUS6Q7Z4H7 955 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 SLC30A5Q8TAD4 765 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 CYP2W1Q8TAV3 490 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 MIEF2Q96C03 454 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms