RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 CEP72Q9P209 647 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 HESX1Q9UBX0 185 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 AGAP1Q9UPQ3 857 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 GOLGB1Q14789 3259 aaKnown RBP12.64□□□□□ -0.39
C2orf88-201ENST00000340623 CCDC66A2RUB6 948 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 ASGR1P07306 291 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 FXR1P51114 621 aaKnown RBP eCLIP12.64□□□□□ -0.39
C2orf88-201ENST00000340623 CDR1P51861 262 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 HLTFQ14527 1009 aaKnown RBP eCLIP12.64□□□□□ -0.39
C2orf88-201ENST00000340623 WDR72Q3MJ13 1102 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 LIN9Q5TKA1 542 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 CDKAL1Q5VV42 579 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 MTHFD1LQ6UB35 978 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 TMEM270Q6UE05 265 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 MPZL3Q6UWV2 235 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 OR6B3Q8NGW1 331 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 BSNDQ8WZ55 320 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 SNX25Q9H3E2 840 aa12.64□□□□□ -0.39
C2orf88-201ENST00000340623 A0A1W2PQC6 194 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 BUB1O43683 1085 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 SPOPO43791 374 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 SEC31AO94979 1220 aaKnown RBP12.63□□□□□ -0.39
C2orf88-201ENST00000340623 H2AFZP0C0S5 128 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 LMAN1P49257 510 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 IFRD2Q12894 506 aaPredicted RBP12.63□□□□□ -0.39
C2orf88-201ENST00000340623 H2AFVQ71UI9 128 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 LRRC15Q8TF66 581 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 ZNF296Q8WUU4 475 aaPredicted RBP12.63□□□□□ -0.39
C2orf88-201ENST00000340623 LMBR1Q8WVP7 490 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 GOLGA1Q92805 767 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 LTBP1Q14766 1721 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 TMEM132DQ14C87 1099 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 KCNA10Q16322 511 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 DNAJC21Q5F1R6 531 aaKnown RBP12.63□□□□□ -0.39
C2orf88-201ENST00000340623 PHLDB2Q86SQ0 1253 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 PAF1Q8N7H5 531 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 NHEJ1Q9H9Q4 299 aaPredicted RBP12.63□□□□□ -0.39
C2orf88-201ENST00000340623 TRAF3IP3Q9Y228 551 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 USTQ9Y2C2 406 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 ZMYND10O75800 440 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 MAPTP10636 758 aaKnown RBP12.63□□□□□ -0.39
C2orf88-201ENST00000340623 GARTP22102 1010 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 BPIFB4P59827 614 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 NCOA4Q13772 614 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 TERF2Q15554 542 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 MAP4K3Q8IVH8 894 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 TSGA10Q9BZW7 698 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 XPNPEP1Q9NQW7 623 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 PPME1Q9Y570 386 aa12.63□□□□□ -0.39
C2orf88-201ENST00000340623 ZNF18P17022 549 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 EDNRBP24530 442 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
C2orf88-201ENST00000340623 E4F1Q66K89 784 aaPredicted RBP12.62□□□□□ -0.39
C2orf88-201ENST00000340623 GJB7Q6PEY0 223 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 SLAIN1Q8ND83 568 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 TRIB2Q92519 343 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 ZBED2Q9BTP6 218 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 RNF19AQ9NV58 838 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 ACKR2O00590 384 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 TREHO43280 583 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 EDIL3O43854 480 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 HLA-DRAP01903 254 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 CLTAP09496 248 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 CTNNA2P26232 953 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 ARPP19P56211 112 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 SNRPFP62306 86 aaKnown RBP12.62□□□□□ -0.39
C2orf88-201ENST00000340623 RAB20Q9NX57 234 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 FHOD1Q9Y613 1164 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 DNAJC25-GNG10A0A024R161 153 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 CXCL8P10145 99 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 ITGA4P13612 1032 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 NSFP46459 744 aaKnown RBP12.62□□□□□ -0.39
C2orf88-201ENST00000340623 CCZ1BP86790 482 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 CCZ1P86791 482 aaPredicted RBP12.62□□□□□ -0.39
C2orf88-201ENST00000340623 SLC35F6Q8N357 371 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 ELMO3Q96BJ8 720 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 PANX2Q96RD6 677 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 RABEP2Q9H5N1 569 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 DHX33Q9H6R0 707 aaKnown RBP12.62□□□□□ -0.39
C2orf88-201ENST00000340623 BZW2Q9Y6E2 419 aaKnown RBP12.62□□□□□ -0.39
C2orf88-201ENST00000340623 CDK5RAP2Q96SN8 1893 aa12.62□□□□□ -0.39
C2orf88-201ENST00000340623 STAG3L1P0CL83 205 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 CCND3P30281 292 aaPredicted RBP12.61□□□□□ -0.39
C2orf88-201ENST00000340623 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
C2orf88-201ENST00000340623 TM4SF4P48230 202 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 KIF11P52732 1056 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 CACNB2Q08289 660 aaPredicted RBP12.61□□□□□ -0.39
C2orf88-201ENST00000340623 TRIM32Q13049 653 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 KIAA0319LQ8IZA0 1049 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 HEXIM2Q96MH2 286 aaKnown RBP12.61□□□□□ -0.39
C2orf88-201ENST00000340623 B4GALT5O43286 388 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 SERPING1P05155 500 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 UCHL3P15374 230 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 EIF4BP23588 611 aaKnown RBP12.61□□□□□ -0.39
C2orf88-201ENST00000340623 GTF2BQ00403 316 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 KIAA1841Q6NSI8 718 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 TAPT1Q6NXT6 567 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 PASD1Q8IV76 773 aa12.61□□□□□ -0.39
C2orf88-201ENST00000340623 NIFKQ9BYG3 293 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms