RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 GSTCDQ8NEC7 633 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 COLEC11Q9BWP8 271 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 EMILIN2Q9BXX0 1053 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 CCSER1Q9C0I3 900 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 DZANK1Q9NVP4 752 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 BARX2Q9UMQ3 279 aaPredicted RBP14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 MTMR6Q9Y217 621 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 TTLL13PA6NNM8 815 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 CA8P35219 290 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 STRN3Q13033 797 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 TUSC3Q13454 348 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 PTPAQ15257 358 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 CLUL1Q15846 466 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 TPRNQ4KMQ1 711 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 NT5DC1Q5TFE4 455 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 ANKRD54Q6NXT1 300 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 VN1R2Q8NFZ6 395 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 BCL7CQ8WUZ0 217 aaPredicted RBP14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 HERC2P3Q9BVR0 1158 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 C1QTNF1Q9BXJ1 281 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 MRPL17Q9NRX2 175 aaKnown RBP14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 SNTG2Q9NY99 539 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 CCDC39Q9UFE4 941 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 SRPRBQ9Y5M8 271 aaKnown RBP14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 CLIC4Q9Y696 253 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 C5orf42Q9H799 3197 aa14.65□□□□□ -0.06
SIRPB3P-201ENST00000340424 CLASP2O75122 1294 aaKnown RBP14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 RECQL4O94761 1208 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 C1RP00736 705 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 URODP06132 367 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 THP07101 528 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 HSP90AA1P07900 732 aaKnown RBP14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 SSTR3P32745 418 aaPredicted RBP14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 PTPN14Q15678 1187 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 TMEM161BQ8NDZ6 487 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 PLIN2Q99541 437 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 ACO2Q99798 780 aaKnown RBP14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 POLD4Q9HCU8 107 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 PTPRHQ9HD43 1115 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 TOPORSQ9NS56 1045 aaPredicted RBP14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 MARCH5Q9NX47 278 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 MIOSQ9NXC5 875 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 DPP7Q9UHL4 492 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 FBXO2Q9UK22 296 aaPredicted RBP14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 PRG3Q9Y2Y8 225 aaPredicted RBP14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 HCFC2Q9Y5Z7 792 aa14.64□□□□□ -0.07
SIRPB3P-201ENST00000340424 BRD1O95696 1058 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 EFEMP2O95967 443 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 EDN1P05305 212 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 MAPTP10636 758 aaKnown RBP14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 MCF2P10911 925 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 PLCG1P19174 1290 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 GRM5P41594 1212 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 YARSP54577 528 aaKnown RBP14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 CREMQ03060 361 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 ITIH3Q06033 890 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 SLC39A14Q15043 492 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 KARSQ15046 597 aaKnown RBP14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 ZNF568Q3ZCX4 644 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 EEF1DP3Q658K8 133 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 ELMSAN1Q6PJG2 1045 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 MPZL3Q6UWV2 235 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 ZPBP2Q6X784 338 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 GPBP1Q86WP2 473 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 RNF168Q8IYW5 571 aaPredicted RBP14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 EFCAB3Q8N7B9 438 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 SUSD6Q92537 303 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 LARP4BQ92615 738 aaKnown RBP14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 RAD54LQ92698 747 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 NECTIN4Q96NY8 510 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 CCDC94Q9BW85 323 aaPredicted RBP14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 VN1R3Q9BXE9 311 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 PARVGQ9HBI0 331 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 BLOC1S4Q9NUP1 217 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 KLK14Q9P0G3 267 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 STK17AQ9UEE5 414 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 ADAM28Q9UKQ2 775 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 USP15Q9Y4E8 981 aaPredicted RBP14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 MYH11P35749 1972 aa14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 SF3B1O75533 1304 aaKnown RBP eCLIP14.63□□□□□ -0.07
SIRPB3P-201ENST00000340424 SLC16A4O15374 487 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 LILRB3O75022 631 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 TOM1L1O75674 476 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 KRT18P05783 430 aaKnown RBP14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 ALADP13716 330 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 PROZP22891 400 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 DDIT3P35638 169 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 NASPP49321 788 aaPredicted RBP14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 GLUD2P49448 558 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 ZNF131P52739 623 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 NCKAP1LP55160 1127 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 DSG1Q02413 1049 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 GRIN1Q05586 938 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 RAD51AP2Q09MP3 1159 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 ELAVL2Q12926 359 aaKnown RBP14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 HSP90AA2PQ14568 343 aaPredicted RBP14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 ARSHQ5FYA8 562 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 CES5AQ6NT32 575 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 LLGL2Q6P1M3 1020 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 TAS1R3Q7RTX0 852 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms