RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 FAM102BQ5T8I3 360 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 PIGWQ7Z7B1 504 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 EIF1ADQ8N9N8 165 aaKnown RBP17.26■□□□□ 0.35
SCARB1-202ENST00000339570 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 OLFML3Q9NRN5 406 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 TCEAL9Q9UHQ7 104 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-202ENST00000339570 Q4G0T1 1027 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 VSIG1Q86XK7 387 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 SEMA4DQ92854 862 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 A0A1B0GUA9 196 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 MAPK4P31152 587 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 PRELPP51888 382 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 RWDD2BP57060 319 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 SYCP2LQ5T4T6 812 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 SPATA21Q7Z572 469 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 EPS8L1Q8TE68 723 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 CSRNP1Q96S65 589 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 SLCO1B3Q9NPD5 702 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 HSPBP1Q9NZL4 362 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 ANAPC5Q9UJX4 755 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 PODXLO00592 558 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 YY1P25490 414 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 TARSP26639 723 aaKnown RBP17.25■□□□□ 0.35
SCARB1-202ENST00000339570 STXBP4Q6ZWJ1 553 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 IPO5O00410 1097 aaKnown RBP17.25■□□□□ 0.35
SCARB1-202ENST00000339570 BBOX1O75936 387 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 RARGP13631 454 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 RASA3Q14644 834 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 WLSQ5T9L3 541 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 FOXR2Q6PJQ5 311 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 MIER3Q7Z3K6 550 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 DAW1Q8N136 415 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 KREMEN1Q96MU8 473 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 C12orf65Q9H3J6 166 aaKnown RBP17.25■□□□□ 0.35
SCARB1-202ENST00000339570 DONSONQ9NYP3 566 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 PI4KBQ9UBF8 816 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 FAM198AQ9UFP1 575 aa17.25■□□□□ 0.35
SCARB1-202ENST00000339570 ASAP2O43150 1006 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 ZSCAN5DPP0CG00 497 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 PEX5P50542 639 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 RC3H1Q5TC82 1133 aaKnown RBP17.24■□□□□ 0.35
SCARB1-202ENST00000339570 SPDL1Q96EA4 605 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 NACC1Q96RE7 527 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 FIZ1Q96SL8 496 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 WDR11Q9BZH6 1224 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 TMEM117Q9H0C3 514 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 NKIRAS1Q9NYS0 192 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 IGLV3-22A0A075B6J6 115 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 RTN2O75298 545 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 BANF1O75531 89 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 ADRB2P07550 413 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 MYCLP12524 364 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-202ENST00000339570 ATF2P15336 505 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 SLMAPQ14BN4 828 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 BMT2Q1RMZ1 405 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 VSTM1Q6UX27 236 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 COL23A1Q86Y22 540 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-202ENST00000339570 DCAF4Q8WV16 495 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 CCDC17Q96LX7 622 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 POLR3CQ9BUI4 534 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-202ENST00000339570 GLT8D2Q9H1C3 349 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 C10orf88Q9H8K7 445 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 SLC12A4Q9UP95 1085 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 GTPBP10A4D1E9 387 aaKnown RBP17.24■□□□□ 0.35
SCARB1-202ENST00000339570 RASA4BC9J798 803 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 RASA4O43374 803 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 IFNB1P01574 187 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 POLR2MP0CAP2 368 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 ATF7P17544 494 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-202ENST00000339570 DGKZQ13574 1117 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 TMX4Q9H1E5 349 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-202ENST00000339570 AAASQ9NRG9 546 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 ARFGEF1Q9Y6D6 1849 aa17.24■□□□□ 0.35
SCARB1-202ENST00000339570 MIF4GDA9UHW6 222 aaKnown RBP17.23■□□□□ 0.35
SCARB1-202ENST00000339570 FOSP01100 380 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-202ENST00000339570 PDHA1P08559 390 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 KRT15P19012 456 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 NT5C2P49902 561 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 ATP13A4Q4VNC1 1196 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 NAIF1Q69YI7 327 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-202ENST00000339570 ZNF365Q70YC5 407 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 LMO3Q8TAP4 145 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 TAS1R2Q8TE23 839 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 KLF6Q99612 283 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-202ENST00000339570 PITPNM3Q9BZ71 974 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 A1CFQ9NQ94 594 aaKnown RBP17.23■□□□□ 0.35
SCARB1-202ENST00000339570 HAO1Q9UJM8 370 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 ENO4A6NNW6 628 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 BHMG1C9JSJ3 638 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-202ENST00000339570 KRT10P13645 584 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 ETS1P14921 441 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 GCKP35557 465 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 STAT2P52630 851 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 COPS2P61201 443 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 KIF22Q14807 665 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 SYT11Q9BT88 431 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 COA1Q9GZY4 146 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 STMN4Q9H169 189 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-202ENST00000339570 KLHL14Q9P2G3 628 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms