RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CCND2P30279 289 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 FMNL3Q8IVF7 1028 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 PPM1KQ8N3J5 372 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 UBLCP1Q8WVY7 318 aaPredicted RBP17.57■□□□□ 0.4
LITAF-201ENST00000339430 ALG3Q92685 438 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 SLITRK6Q9H5Y7 841 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 ZEB2O60315 1214 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 SKOR1P84550 965 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 CD302Q8IX05 232 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 GPRC5AQ8NFJ5 357 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 PORCNQ9H237 461 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 LCTP09848 1927 aa17.57■□□□□ 0.4
LITAF-201ENST00000339430 DOCK5Q9H7D0 1870 aa17.56■□□□□ 0.4
LITAF-201ENST00000339430 MARCKSL1P49006 195 aa17.56■□□□□ 0.4
LITAF-201ENST00000339430 GUCY1A3Q02108 690 aa17.56■□□□□ 0.4
LITAF-201ENST00000339430 C12orf56Q8IXR9 622 aa17.56■□□□□ 0.4
LITAF-201ENST00000339430 GTF3C2Q8WUA4 911 aaPredicted RBP17.56■□□□□ 0.4
LITAF-201ENST00000339430 ATP6V1G3Q96LB4 118 aa17.56■□□□□ 0.4
LITAF-201ENST00000339430 PCDHB18PQ96TA0 734 aa17.56■□□□□ 0.4
LITAF-201ENST00000339430 ABT1Q9ULW3 272 aaKnown RBP17.56■□□□□ 0.4
LITAF-201ENST00000339430 UTP11Q9Y3A2 253 aaKnown RBP17.56■□□□□ 0.4
LITAF-201ENST00000339430 ALG6Q9Y672 507 aa17.56■□□□□ 0.4
LITAF-201ENST00000339430 WDR81Q562E7 1941 aa17.56■□□□□ 0.4
LITAF-201ENST00000339430 BHMG1C9JSJ3 638 aaPredicted RBP17.55■□□□□ 0.4
LITAF-201ENST00000339430 CYP26A1O43174 497 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 SORBS3O60504 671 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 PGK2P07205 417 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 NR1D1P20393 614 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 ADSSP30520 456 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 CTNNA1P35221 906 aaKnown RBP17.55■□□□□ 0.4
LITAF-201ENST00000339430 NCKAP1LP55160 1127 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 PSMC5P62195 406 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 SNRNP35Q16560 246 aaKnown RBP17.55■□□□□ 0.4
LITAF-201ENST00000339430 XRRA1Q6P2D8 792 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 NOP9Q86U38 636 aaKnown RBP17.55■□□□□ 0.4
LITAF-201ENST00000339430 SLC47A2Q86VL8 602 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 C4orf19Q8IY42 314 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 KRT35Q92764 455 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 SEMA4DQ92854 862 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 KREMEN1Q96MU8 473 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 MROH8Q9H579 483 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 EFCC1Q9HA90 598 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 TOPORSQ9NS56 1045 aaPredicted RBP17.55■□□□□ 0.4
LITAF-201ENST00000339430 TLL2Q9Y6L7 1015 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 WDR64B1ANS9 1081 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 LYPLA2O95372 231 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 HPDP32754 393 aaPredicted RBP17.55■□□□□ 0.4
LITAF-201ENST00000339430 FSTL1Q12841 308 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 MESDQ14696 234 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 RHOT2Q8IXI1 618 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 DNERQ8NFT8 737 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 GLG1Q92896 1179 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 PARK7Q99497 189 aaKnown RBP17.55■□□□□ 0.4
LITAF-201ENST00000339430 CARD9Q9H257 536 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 KIAA1217Q5T5P2 1943 aa17.55■□□□□ 0.4
LITAF-201ENST00000339430 CHRNB2P17787 502 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 NPTX2P47972 431 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 GCLCP48506 637 aaPredicted RBP17.54■□□□□ 0.4
LITAF-201ENST00000339430 POU5F1Q01860 360 aaKnown RBP17.54■□□□□ 0.4
LITAF-201ENST00000339430 SP4Q02446 784 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 KCTD2Q14681 263 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 KDM7AQ6ZMT4 941 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 ANO5Q75V66 913 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 EIF1ADQ8N9N8 165 aaKnown RBP17.54■□□□□ 0.4
LITAF-201ENST00000339430 EPS8L1Q8TE68 723 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.54■□□□□ 0.4
LITAF-201ENST00000339430 LRRC45Q96CN5 670 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 BTBD6Q96KE9 485 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 FAM84AQ96KN4 292 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 MMP19Q99542 508 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 BCCIPQ9P287 314 aaKnown RBP eCLIP17.54■□□□□ 0.4
LITAF-201ENST00000339430 TBX20Q9UMR3 447 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 TELO2Q9Y4R8 837 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 ZNFX1Q9P2E3 1918 aaKnown RBP17.54■□□□□ 0.4
LITAF-201ENST00000339430 DENND3A2RUS2 1198 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 SOWAHBA6NEL2 793 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 GOLGA6L10A6NI86 522 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 IGF2BP3O00425 579 aaKnown RBP eCLIP17.54■□□□□ 0.45e-7■■□□□ 12.8
LITAF-201ENST00000339430 P4HA2O15460 535 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 CLSTN1O94985 981 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 MMEP08473 750 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 GPC5P78333 572 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 CPNE8Q86YQ8 564 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 BSNDQ8WZ55 320 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 TMBIM4Q9HC24 238 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 TTC7AQ9ULT0 858 aaPredicted RBP17.54■□□□□ 0.4
LITAF-201ENST00000339430 DAAM1Q9Y4D1 1078 aa17.54■□□□□ 0.4
LITAF-201ENST00000339430 MANSC4A6NHS7 340 aaPredicted RBP17.53■□□□□ 0.4
LITAF-201ENST00000339430 H0YGN5 161 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 RGS20O76081 388 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 SLC10A3P09131 477 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 CNGA1P29973 690 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 ALDH5A1P51649 535 aaPredicted RBP17.53■□□□□ 0.4
LITAF-201ENST00000339430 JAK3P52333 1124 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 PTENP60484 403 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 CCNA1P78396 465 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 TMEM161BQ8NDZ6 487 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 SHCBP1Q8NEM2 672 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 IWS1Q96ST2 819 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 NFS1Q9Y697 457 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms