RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 P4HA2O15460 535 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 UCHL3P15374 230 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 WNT7BP56706 349 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 LMBRD2Q68DH5 695 aaPredicted RBP15.94■□□□□ 0.14
CBX3-201ENST00000337620 KRT39Q6A163 491 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 DPY19L2P1Q6NXN4 242 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 CYP26C1Q6V0L0 522 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 CATSPER4Q7RTX7 472 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 EHBP1Q8NDI1 1231 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 BAP1Q92560 729 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 FAM212AQ96EL1 285 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 CDT1Q9H211 546 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 PDZD7Q9H5P4 517 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 TMEM8AQ9HCN3 771 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 PTPN22Q9Y2R2 807 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 GRIN2DO15399 1336 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 FAM189A1O60320 539 aa15.93■□□□□ 0.14
CBX3-201ENST00000337620 DARSP14868 501 aaKnown RBP15.93■□□□□ 0.14
CBX3-201ENST00000337620 EIF4BP23588 611 aaKnown RBP15.93■□□□□ 0.14
CBX3-201ENST00000337620 NCBP1Q09161 790 aaKnown RBP15.93■□□□□ 0.14
CBX3-201ENST00000337620 WDR59Q6PJI9 974 aa15.93■□□□□ 0.14
CBX3-201ENST00000337620 TMTC1Q8IUR5 882 aa15.93■□□□□ 0.14
CBX3-201ENST00000337620 GPIHBP1Q8IV16 184 aa15.93■□□□□ 0.14
CBX3-201ENST00000337620 CHP1Q99653 195 aa15.93■□□□□ 0.14
CBX3-201ENST00000337620 SIX2Q9NPC8 291 aa15.93■□□□□ 0.14
CBX3-201ENST00000337620 FHOD1Q9Y613 1164 aa15.93■□□□□ 0.14
CBX3-201ENST00000337620 CABYRO75952 493 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 GTF2H1P32780 548 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 ENPEPQ07075 957 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 ITGA7Q13683 1181 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 MTF1Q14872 753 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 PDXDC1Q6P996 788 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 GJB7Q6PEY0 223 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 CEP120Q8N960 986 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 FAM84AQ96KN4 292 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.92■□□□□ 0.143e-6■■□□□ 14.4
CBX3-201ENST00000337620 RRAGDQ9NQL2 400 aaPredicted RBP15.92■□□□□ 0.14
CBX3-201ENST00000337620 CPSF3Q9UKF6 684 aaKnown RBP15.92■□□□□ 0.14
CBX3-201ENST00000337620 ZNF500O60304 480 aaPredicted RBP15.92■□□□□ 0.14
CBX3-201ENST00000337620 FECHP22830 423 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 RAPGEF1Q13905 1077 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 SNX17Q15036 470 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 PTGISQ16647 500 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 EPC2Q52LR7 807 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 SV2AQ7L0J3 742 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 RSPH3Q86UC2 560 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 BRSK2Q8IWQ3 736 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 ZNF516Q92618 1163 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 GLT1D1Q96MS3 346 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 SPAG5Q96R06 1193 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 UNC93B1Q9H1C4 597 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.92■□□□□ 0.147e-6■■■■■ 53.1
CBX3-201ENST00000337620 TRMT1Q9NXH9 659 aaKnown RBP15.92■□□□□ 0.14
CBX3-201ENST00000337620 PLAGL2Q9UPG8 496 aa15.92■□□□□ 0.14
CBX3-201ENST00000337620 A0A1B0GUA9 196 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 MOXD2PA6NHM9 499 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 M0QZ92 97 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 PMM2O15305 246 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 LRRN2O75325 713 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 MCF2P10911 925 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 CRYBB1P53674 252 aaPredicted RBP15.91■□□□□ 0.14
CBX3-201ENST00000337620 SLC9C1Q4G0N8 1177 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 E4F1Q66K89 784 aaPredicted RBP15.91■□□□□ 0.14
CBX3-201ENST00000337620 RAD9BQ6WBX8 426 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 SESTD1Q86VW0 696 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 ARRDC4Q8NCT1 418 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 LMO3Q8TAP4 145 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 TMEM40Q8WWA1 233 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 ADPGKQ9BRR6 497 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 CELF4Q9BZC1 486 aaKnown RBP15.91■□□□□ 0.14
CBX3-201ENST00000337620 KCNJ6P48051 423 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 CLDN10P78369 228 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 MRPS6P82932 125 aaKnown RBP15.91■□□□□ 0.14
CBX3-201ENST00000337620 MEA1Q16626 185 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 SFMBT2Q5VUG0 894 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 IQCEQ6IPM2 695 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 TOGARAM2Q6ZUX3 1019 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 SERINC5Q86VE9 423 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 TMEM192Q8IY95 271 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 ZNF710Q8N1W2 664 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 FBXL13Q8NEE6 735 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 TAS1R2Q8TE23 839 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 WNT8BQ93098 351 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 TSEN34Q9BSV6 310 aaKnown RBP15.91■□□□□ 0.14
CBX3-201ENST00000337620 NUCKS1Q9H1E3 243 aaKnown RBP15.91■□□□□ 0.14
CBX3-201ENST00000337620 APEX2Q9UBZ4 518 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 FBXL5Q9UKA1 691 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 AJAP1Q9UKB5 411 aaPredicted RBP15.91■□□□□ 0.14
CBX3-201ENST00000337620 NOD1Q9Y239 953 aa15.91■□□□□ 0.14
CBX3-201ENST00000337620 PTPRJQ12913 1337 aa15.9■□□□□ 0.14
CBX3-201ENST00000337620 RBAK-RBAKDNI3L0D1 243 aa15.9■□□□□ 0.14
CBX3-201ENST00000337620 CTSHP09668 335 aa15.9■□□□□ 0.14
CBX3-201ENST00000337620 STAG3L1P0CL83 205 aa15.9■□□□□ 0.14
CBX3-201ENST00000337620 HOXA11P31270 313 aaPredicted RBP15.9■□□□□ 0.14
CBX3-201ENST00000337620 HNRNPH3P31942 346 aaKnown RBP15.9■□□□□ 0.14
CBX3-201ENST00000337620 ARID5AQ03989 594 aa15.9■□□□□ 0.14
CBX3-201ENST00000337620 BIRC3Q13489 604 aa15.9■□□□□ 0.14
CBX3-201ENST00000337620 PCBP1Q15365 356 aaKnown RBP eCLIP15.9■□□□□ 0.14
CBX3-201ENST00000337620 ENOX2Q16206 610 aaKnown RBP15.9■□□□□ 0.14
CBX3-201ENST00000337620 PHLDB3Q6NSJ2 640 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms