RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 CDC25AP30304 524 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 NPTX2P47972 431 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 PTPN21Q16825 1174 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 TMEM132AQ24JP5 1023 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 USP41Q3LFD5 358 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 ATF7IP2Q5U623 682 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 LARP1BQ659C4 914 aaKnown RBP19.54■□□□□ 0.72
HDDC3-201ENST00000330334 FUT10Q6P4F1 479 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 ELMSAN1Q6PJG2 1045 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 DAW1Q8N136 415 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 CMASQ8NFW8 434 aaPredicted RBP19.54■□□□□ 0.72
HDDC3-201ENST00000330334 FAM122AQ96E09 287 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 KIFC3Q9BVG8 833 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 GPR62Q9BZJ7 368 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 NT5C3AQ9H0P0 336 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 FNIP2Q9P278 1114 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 ARHGAP28Q9P2N2 729 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 TNFSF13BQ9Y275 285 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 TECTAO75443 2155 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 F8W810 466 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 C2CD2LO14523 706 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 PTGESO14684 152 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 HIP1RO75146 1068 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 TADA2AO75478 443 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 RECQL4O94761 1208 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 CREMQ03060 361 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 SIGLEC14Q08ET2 396 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 DMP1Q13316 513 aaPredicted RBP19.53■□□□□ 0.72
HDDC3-201ENST00000330334 HSP90AA2PQ14568 343 aaPredicted RBP19.53■□□□□ 0.72
HDDC3-201ENST00000330334 NAB2Q15742 525 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 EEF1DP3Q658K8 133 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 ZDHHC14Q8IZN3 488 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 PLCD3Q8N3E9 789 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 AK8Q96MA6 479 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 POLD4Q9HCU8 107 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 KCND2Q9NZV8 630 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 CDH22Q9UJ99 828 aa19.53■□□□□ 0.72
HDDC3-201ENST00000330334 TMEM221A6NGB7 291 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 CCDC169A6NNP5 214 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 M0R296 226 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 PEX3P56589 373 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 MAPK7Q13164 816 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 KANK3Q6NY19 840 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 TMC5Q6UXY8 1006 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 KCNK18Q7Z418 384 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 SYT2Q8N9I0 419 aaPredicted RBP19.52■□□□□ 0.72
HDDC3-201ENST00000330334 RUSC1Q9BVN2 902 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 PTPRHQ9HD43 1115 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 USP20Q9Y2K6 914 aa19.52■□□□□ 0.72
HDDC3-201ENST00000330334 SF3B1O75533 1304 aaKnown RBP eCLIP19.51■□□□□ 0.71
HDDC3-201ENST00000330334 C2CD4DB7Z1M9 353 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 BMP15O95972 392 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 GLUD1P00367 558 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 LIG1P18858 919 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 CUL4AQ13619 759 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 BRAPQ7Z569 592 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 SPIRE2Q8WWL2 714 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 PNMA5Q96PV4 448 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 ACO2Q99798 780 aaKnown RBP19.51■□□□□ 0.71
HDDC3-201ENST00000330334 MRPL4Q9BYD3 311 aaKnown RBP19.51■□□□□ 0.71
HDDC3-201ENST00000330334 PLEKHA4Q9H4M7 779 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 KMT5AQ9NQR1 393 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 MUC6Q6W4X9 2439 aa19.51■□□□□ 0.71
HDDC3-201ENST00000330334 TDRD15B5MCY1 1934 aaKnown RBP19.51■□□□□ 0.71
HDDC3-201ENST00000330334 VWA3AA6NCI4 1184 aa19.5■□□□□ 0.71
HDDC3-201ENST00000330334 BRD1O95696 1058 aa19.5■□□□□ 0.71
HDDC3-201ENST00000330334 WEE2P0C1S8 567 aa19.5■□□□□ 0.71
HDDC3-201ENST00000330334 ELAVL2Q12926 359 aaKnown RBP19.5■□□□□ 0.71
HDDC3-201ENST00000330334 XKR4Q5GH76 650 aa19.5■□□□□ 0.71
HDDC3-201ENST00000330334 LILRA6Q6PI73 481 aa19.5■□□□□ 0.71
HDDC3-201ENST00000330334 UBALD2Q8IYN6 164 aa19.5■□□□□ 0.71
HDDC3-201ENST00000330334 KCNN1Q92952 543 aa19.5■□□□□ 0.71
HDDC3-201ENST00000330334 PBXIP1Q96AQ6 731 aa19.5■□□□□ 0.71
HDDC3-201ENST00000330334 PAAF1Q9BRP4 392 aa19.5■□□□□ 0.71
HDDC3-201ENST00000330334 MAN1C1Q9NR34 630 aa19.5■□□□□ 0.71
HDDC3-201ENST00000330334 TMEM189-UBE2V1I3L0A0 370 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 PROZP22891 400 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 GRM5P41594 1212 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 SLC12A3P55017 1021 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 TMEM119Q4V9L6 283 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 ALKAL1Q6UXT8 129 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 OTOP3Q7RTS5 596 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 TAS1R3Q7RTX0 852 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 TDRD5Q8NAT2 981 aaKnown RBP19.49■□□□□ 0.71
HDDC3-201ENST00000330334 RIN2Q8WYP3 895 aaPredicted RBP19.49■□□□□ 0.71
HDDC3-201ENST00000330334 ASIC4Q96FT7 647 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 PPP1R10Q96QC0 940 aaKnown RBP19.49■□□□□ 0.71
HDDC3-201ENST00000330334 TTPALQ9BTX7 342 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 TOPORSQ9NS56 1045 aaPredicted RBP19.49■□□□□ 0.71
HDDC3-201ENST00000330334 SORCS3Q9UPU3 1222 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 GDAQ9Y2T3 454 aa19.49■□□□□ 0.71
HDDC3-201ENST00000330334 WDFY4Q6ZS81 3184 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 CASTOR2A6NHX0 329 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 SPDYE4A6NLX3 237 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 KIF4AO95239 1232 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 PLA2G4BP0C869 781 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 MCF2P10911 925 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 PLS3P13797 630 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 PDCP20941 246 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms